RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ATP2A2P16615 1042 aaKnown RBP19.27■□□□□ 0.68
HMGN1-206ENST00000431390 PSMC1P62191 440 aaKnown RBP19.27■□□□□ 0.68
HMGN1-206ENST00000431390 TFF2Q03403 129 aa19.27■□□□□ 0.68
HMGN1-206ENST00000431390 YWHAHQ04917 246 aaPredicted RBP19.27■□□□□ 0.68
HMGN1-206ENST00000431390 KIAA0319Q5VV43 1072 aa19.27■□□□□ 0.68
HMGN1-206ENST00000431390 MMS22LQ6ZRQ5 1243 aa19.27■□□□□ 0.68
HMGN1-206ENST00000431390 TTC30AQ86WT1 665 aa19.27■□□□□ 0.68
HMGN1-206ENST00000431390 TPCN2Q8NHX9 752 aa19.27■□□□□ 0.68
HMGN1-206ENST00000431390 OSGEPQ9NPF4 335 aa19.27■□□□□ 0.68
HMGN1-206ENST00000431390 CTTNBP2NLQ9P2B4 639 aa19.27■□□□□ 0.68
HMGN1-206ENST00000431390 HCSTQ9UBK5 93 aa19.27■□□□□ 0.68
HMGN1-206ENST00000431390 PRRC2BQ5JSZ5 2229 aaKnown RBP19.27■□□□□ 0.68
HMGN1-206ENST00000431390 SF3B1O75533 1304 aaKnown RBP eCLIP19.27■□□□□ 0.684e-6■□□□□ 8.6
HMGN1-206ENST00000431390 FAM170AA1A519 330 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 ATMINO43313 823 aaPredicted RBP19.27■□□□□ 0.67
HMGN1-206ENST00000431390 ATP2C2O75185 946 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 OAZ2O95190 189 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 CCDC130P13994 396 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 RRM1P23921 792 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 ALDH7A1P49419 539 aaKnown RBP19.27■□□□□ 0.67
HMGN1-206ENST00000431390 BCAT1P54687 386 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 GSCP56915 257 aaPredicted RBP19.27■□□□□ 0.67
HMGN1-206ENST00000431390 BST2Q10589 180 aaKnown RBP19.27■□□□□ 0.67
HMGN1-206ENST00000431390 PDCLQ13371 301 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 INTS6LQ5JSJ4 861 aaKnown RBP19.27■□□□□ 0.67
HMGN1-206ENST00000431390 FUT10Q6P4F1 479 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.27■□□□□ 0.67
HMGN1-206ENST00000431390 UBA3Q8TBC4 463 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 MYCBPAPQ8TBZ2 947 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 SLC2A14Q8TDB8 520 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 STK32AQ8WU08 396 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 NAPGQ99747 312 aaPredicted RBP19.27■□□□□ 0.67
HMGN1-206ENST00000431390 LPIN3Q9BQK8 851 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 MIS12Q9H081 205 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 MRPL47Q9HD33 250 aaKnown RBP19.27■□□□□ 0.67
HMGN1-206ENST00000431390 CRTAC1Q9NQ79 661 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 CYTH4Q9UIA0 394 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 SCINQ9Y6U3 715 aa19.27■□□□□ 0.67
HMGN1-206ENST00000431390 GRID2IPA4D2P6 1211 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 CTAGE9A4FU28 777 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 RFXAPO00287 272 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 PALMO75781 387 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 GABRB2P47870 512 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 PLCB3Q01970 1234 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 PTPN20Q4JDL3 420 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 MDH1BQ5I0G3 518 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 PLEKHA7Q6IQ23 1121 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 FAM171BQ6P995 826 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 FUKQ8N0W3 1084 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 SLC35F5Q8WV83 523 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 NUP85Q9BW27 656 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 WDR35Q9P2L0 1181 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 COG5Q9UP83 839 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 JRKLQ9Y4A0 524 aa19.26■□□□□ 0.67
HMGN1-206ENST00000431390 COL4A4P53420 1690 aaPredicted RBP19.26■□□□□ 0.67
HMGN1-206ENST00000431390 CA3P07451 260 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 BMP1P13497 986 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 FGFR3P22607 806 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 ADORA2BP29275 332 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 TKTP29401 623 aaKnown RBP19.25■□□□□ 0.67
HMGN1-206ENST00000431390 KCNQ1P51787 676 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 BTG3Q14201 252 aaPredicted RBP19.25■□□□□ 0.67
HMGN1-206ENST00000431390 SKIV2LQ15477 1246 aaKnown RBP19.25■□□□□ 0.67
HMGN1-206ENST00000431390 MAPRE1Q15691 268 aaKnown RBP19.25■□□□□ 0.67
HMGN1-206ENST00000431390 SYCE1Q8N0S2 351 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 LRRC57Q8N9N7 239 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 ZNF564Q8TBZ8 553 aaPredicted RBP19.25■□□□□ 0.67
HMGN1-206ENST00000431390 IPO4Q8TEX9 1081 aaKnown RBP19.25■□□□□ 0.67
HMGN1-206ENST00000431390 C18orf8Q96DM3 657 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 CPXM1Q96SM3 734 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 GPR62Q9BZJ7 368 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 CERS4Q9HA82 394 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 CYLDQ9NQC7 956 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 PARVAQ9NVD7 372 aa19.25■□□□□ 0.67
HMGN1-206ENST00000431390 MYBPHLA2RUH7 354 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 LAG3P18627 525 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 SNX16P57768 344 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 TSPY1Q01534 308 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 MRPL58Q14197 206 aaKnown RBP19.24■□□□□ 0.67
HMGN1-206ENST00000431390 C2CD6Q53TS8 623 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 FAM171A1Q5VUB5 890 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 FAM117BQ6P1L5 589 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 PAQR9Q6ZVX9 377 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 TMCO2Q7Z6W1 182 aaPredicted RBP19.24■□□□□ 0.67
HMGN1-206ENST00000431390 SLFN11Q7Z7L1 901 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 C3orf20Q8ND61 904 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 UBE2Q2Q8WVN8 375 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 PKMYT1Q99640 499 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 DUSP16Q9BY84 665 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 XIRP2A4UGR9 3374 aa19.24■□□□□ 0.67
HMGN1-206ENST00000431390 TCRBV5S1A1TA0A578 114 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 NT5C1B-RDH14C9J2C7 533 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 GJB5O95377 273 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 EFEMP2O95967 443 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 RPL34P49207 117 aaKnown RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 SLC8A3P57103 927 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 HTRA4P83105 476 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 TAP1Q03518 808 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 PDE4CQ08493 712 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 MAMLD1Q13495 774 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms