RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 MMS19Q96T76 1030 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 UBXN6Q9BZV1 441 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 NIF3L1Q9GZT8 377 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 CRTAC1Q9NQ79 661 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 MAN1B1Q9UKM7 699 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 GTF3C4Q9UKN8 822 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 KIAA1257Q9ULG3 409 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 POLIQ9UNA4 740 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 MYBPHLA2RUH7 354 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 GTPBP10A4D1E9 387 aaKnown RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 A8MXQ7 604 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 PPP1R3GB7ZBB8 358 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 GOLGA6L22H0YM25 854 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 MAN2B1O00754 1011 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 OLFM2O95897 454 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 HLA-DRAP01903 254 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 ERCC5P28715 1186 aaPredicted RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 CCR2P41597 374 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 ASPAP45381 313 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 NLRP12P59046 1061 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 DLG4P78352 724 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 NTHL1P78549 312 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 PPP3CAQ08209 521 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 PAK1Q13153 545 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 ARHGAP29Q52LW3 1261 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 LMBRD2Q68DH5 695 aaPredicted RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 ANKRD40Q6AI12 368 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 PARM1Q6UWI2 310 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 DENND5BQ6ZUT9 1274 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 MON1AQ86VX9 555 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 CELF5Q8N6W0 485 aaKnown RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 OR6B3Q8NGW1 331 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 MRPS31Q92665 395 aaKnown RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 SMARCD1Q96GM5 515 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 PGLYRP2Q96PD5 576 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 SEPT5Q99719 369 aaPredicted RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 HNRNPABQ99729 332 aaKnown RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 TRMT61BQ9BVS5 477 aaKnown RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 ARHGEF3Q9NR81 526 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 TMLHEQ9NVH6 421 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 HCFC1R1Q9NWW0 138 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 RAB20Q9NX57 234 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 ABI2Q9NYB9 513 aaPredicted RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 DACH1Q9UI36 760 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 RWDD2AQ9UIY3 292 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 MRPS17Q9Y2R5 130 aaKnown RBP9.73□□□□□ -0.85
SMC1A-203ENST00000428014 GREB1Q4ZG55 1949 aa9.73□□□□□ -0.85
SMC1A-203ENST00000428014 KIF26AQ9ULI4 1882 aaPredicted RBP9.72□□□□□ -0.85
SMC1A-203ENST00000428014 ARNTLO00327 626 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 NCAM2O15394 837 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 CILPO75339 1184 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 ASGR2P07307 311 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 CEBPBP17676 345 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 COL9A1P20849 921 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 BMP6P22004 513 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 LMO2P25791 158 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 GABRR2P28476 465 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 AVPR2P30518 371 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 PIK3CAP42336 1068 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 RPS9P46781 194 aaKnown RBP9.72□□□□□ -0.85
SMC1A-203ENST00000428014 GCNT1Q02742 428 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 TAF12Q16514 161 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 WDR44Q5JSH3 913 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 FAM78AQ5JUQ0 283 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 RBM43Q6ZSC3 357 aaKnown RBP9.72□□□□□ -0.85
SMC1A-203ENST00000428014 TMEM150AQ86TG1 271 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 TRIM59Q8IWR1 403 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 CMTM8Q8IZV2 173 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 ZSCAN18Q8TBC5 510 aaPredicted RBP9.72□□□□□ -0.85
SMC1A-203ENST00000428014 FEZF2Q8TBJ5 459 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 TAS1R2Q8TE23 839 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 NOC3LQ8WTT2 800 aaKnown RBP9.72□□□□□ -0.85
SMC1A-203ENST00000428014 MYLPFQ96A32 169 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 EXOC4Q96A65 974 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 IPO9Q96P70 1041 aaKnown RBP9.72□□□□□ -0.85
SMC1A-203ENST00000428014 NT5C1AQ9BXI3 368 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 CLSTN2Q9H4D0 955 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 FBXO44Q9H4M3 255 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 C8orf33Q9H7E9 229 aaPredicted RBP9.72□□□□□ -0.85
SMC1A-203ENST00000428014 DMAP1Q9NPF5 467 aaPredicted RBP9.72□□□□□ -0.85
SMC1A-203ENST00000428014 MAPK8IP1Q9UQF2 711 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 SLC27A5Q9Y2P5 690 aa9.72□□□□□ -0.85
SMC1A-203ENST00000428014 A0A1W2PRU2 124 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 SLC38A8A6NNN8 435 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 GADD45BO75293 160 aaPredicted RBP9.71□□□□□ -0.86
SMC1A-203ENST00000428014 ZDHHC11BP0C7U3 371 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 CCDC192P0DO97 292 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 CYP2F1P24903 491 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 ANXA13P27216 316 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 GCLMP48507 274 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 PMS1P54277 932 aaKnown RBP9.71□□□□□ -0.86
SMC1A-203ENST00000428014 PTPN5P54829 565 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 AMPD2Q01433 879 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 STILQ15468 1287 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 TEAD2Q15562 447 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 MLF2Q15773 248 aaPredicted RBP9.71□□□□□ -0.86
SMC1A-203ENST00000428014 ARHGAP17Q68EM7 881 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 KLHDC10Q6PID8 442 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 ENOSF1Q7L5Y1 443 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms