RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 CERS4Q9HA82 394 aa18.97■□□□□ 0.63
AC055811.2-201ENST00000427497 MYO1FO00160 1098 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 GABRDO14764 452 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 GJB5O95377 273 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 POMCP01189 267 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 LMO2P25791 158 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 CTNNA2P26232 953 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 OSTM1Q86WC4 334 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 GPR161Q8N6U8 529 aaKnown RBP18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 SPATA4Q8NEY3 305 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 FEZF2Q8TBJ5 459 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 ACTRT1Q8TDG2 376 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 DDX27Q96GQ7 796 aaKnown RBP18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 SENP8Q96LD8 212 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 CPXM1Q96SM3 734 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 SELENOOQ9BVL4 669 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 CARD9Q9H257 536 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 SMARCAL1Q9NZC9 954 aa18.96■□□□□ 0.63
AC055811.2-201ENST00000427497 TMEM191CA6NGB0 347 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 CASTOR2A6NHX0 329 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 HCRTO43612 131 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 PROSCO94903 275 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 SLC1A1P43005 524 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 PEX5P50542 639 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 PDCLQ13371 301 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 TUSC3Q13454 348 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 GOLGA7BQ2TAP0 167 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 DCAF12L1Q5VU92 463 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 CPNE8Q86YQ8 564 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 MSANTD4Q8NCY6 345 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 ALG3Q92685 438 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 C18orf8Q96DM3 657 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 UROC1Q96N76 676 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 PAAF1Q9BRP4 392 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 DNAI2Q9GZS0 605 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 TTC7AQ9ULT0 858 aaPredicted RBP18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 LCHNA4D1U4 455 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 EPOPA6NHQ4 379 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 RFXAPO00287 272 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 SETSIPP0DME0 302 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 PAX3P23760 479 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 CTNNA1P35221 906 aaKnown RBP18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 CCDC85BQ15834 202 aaPredicted RBP18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 CLLU1OSQ5K130 101 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 CYP4A22Q5TCH4 519 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 WSCD1Q658N2 575 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 DNAJC24Q6P3W2 148 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 GLB1LQ6UWU2 654 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 TTC30AQ86WT1 665 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 TMEM86AQ8N2M4 240 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 UBL4BQ8N7F7 174 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 UBA3Q8TBC4 463 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 ARNTL2Q8WYA1 636 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 SEPT8Q92599 483 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 KRT35Q92764 455 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 TNIP3Q96KP6 325 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 RAD9AQ99638 391 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 PRDM6Q9NQX0 595 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 WDR35Q9P2L0 1181 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 TJP2Q9UDY2 1190 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 INPP5FQ9Y2H2 1132 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 PCDHA3Q9Y5H8 950 aa18.95■□□□□ 0.62
AC055811.2-201ENST00000427497 PRRC2BQ5JSZ5 2229 aaKnown RBP18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 CCDC66A2RUB6 948 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 SPOPO43791 374 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 CEP104O60308 925 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 ERBB2P04626 1255 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 PDGFRBP09619 1106 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 IBSPP21815 317 aaPredicted RBP18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 MAN1A1P33908 653 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 ZNF268Q14587 947 aaPredicted RBP18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 CD300LGQ6UXG3 332 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 XYLT1Q86Y38 959 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 MMGT1Q8N4V1 131 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 APBB2Q92870 758 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 ELAC1Q9H777 363 aaKnown RBP18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 FAM49BQ9NUQ9 324 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 TMEM161AQ9NX61 479 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 LCMT1Q9UIC8 334 aa18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 SPTBN5Q9NRC6 3674 aaKnown RBP18.94■□□□□ 0.62
AC055811.2-201ENST00000427497 TSC2P49815 1807 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 ENPP3O14638 875 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 GJB6O95452 261 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 POU3F3P20264 500 aaPredicted RBP18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 MARCKSL1P49006 195 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 RPL7AP62424 266 aaKnown RBP18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 C2orf54Q08AI8 447 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 SPRED2Q7Z698 418 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 SLC35F5Q8WV83 523 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 MCRS1Q96EZ8 462 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 LPIN3Q9BQK8 851 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 IP6K2Q9UHH9 426 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 TMEM59LQ9UK28 342 aa18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 COL4A4P53420 1690 aaPredicted RBP18.93■□□□□ 0.62
AC055811.2-201ENST00000427497 SIGLEC16A6NMB1 481 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 PGRMC1O00264 195 aaKnown RBP18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 AMHP03971 560 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 DSC1Q08554 894 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 TIGD5Q53EQ6 642 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms