RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 KIAA0319Q5VV43 1072 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 VSTM1Q6UX27 236 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 TMEM110Q86TL2 294 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 PALB2Q86YC2 1186 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 SYCE1Q8N0S2 351 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 FUKQ8N0W3 1084 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 C1orf131Q8NDD1 294 aaKnown RBP10.91□□□□□ -0.66
MDC1-205ENST00000425072 TRIM58Q8NG06 486 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 OLIG1Q8TAK6 271 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 SLC35G2Q8TBE7 412 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 SPPL2BQ8TCT7 592 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 RIN2Q8WYP3 895 aaPredicted RBP10.91□□□□□ -0.66
MDC1-205ENST00000425072 PIK3R5Q8WYR1 880 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 KCTD13Q8WZ19 329 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 RFFLQ8WZ73 363 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 SMARCD1Q96GM5 515 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 PCED1BQ96HM7 432 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 ALS2CR12Q96Q35 445 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 RTP3Q9BQQ7 232 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 SLC4A5Q9BY07 1137 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 THAP2Q9H0W7 228 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 ABCB6Q9NP58 842 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 CRTAC1Q9NQ79 661 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 ST7Q9NRC1 585 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 MRPL17Q9NRX2 175 aaKnown RBP10.91□□□□□ -0.66
MDC1-205ENST00000425072 CTTNBP2NLQ9P2B4 639 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 LZTS1Q9Y250 596 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 NME7Q9Y5B8 376 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 PCDHB5Q9Y5E4 795 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 PCDHA11Q9Y5I1 949 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 RCCD1A6NED2 376 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 SIGLEC16A6NMB1 481 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 MYO1FO00160 1098 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 TBC1D4O60343 1298 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 LPXNO60711 386 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 AP1G2O75843 785 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 FGF18O76093 207 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 CCDC130P13994 396 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 NPR3P17342 541 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 SSTR3P32745 418 aaPredicted RBP10.9□□□□□ -0.66
MDC1-205ENST00000425072 BMP8BP34820 402 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 PBX3P40426 434 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 TUFMP49411 452 aaKnown RBP10.9□□□□□ -0.66
MDC1-205ENST00000425072 GLUD2P49448 558 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 GNG11P61952 73 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 DSG1Q02413 1049 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 UBE3AQ05086 875 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 PDE4CQ08493 712 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 CFAP221Q4G0U5 840 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 SLC39A12Q504Y0 691 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 ZNF569Q5MCW4 686 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 DNTTIP2Q5QJE6 756 aaKnown RBP10.9□□□□□ -0.66
MDC1-205ENST00000425072 TPGS2Q68CL5 300 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 NYAP1Q6ZVC0 841 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 PAQR9Q6ZVX9 377 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 TAS1R1Q7RTX1 841 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 LRRTM3Q86VH5 581 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 RNF168Q8IYW5 571 aaPredicted RBP10.9□□□□□ -0.66
MDC1-205ENST00000425072 VPS52Q8N1B4 723 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 FBXO22Q8NEZ5 403 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 ZNF653Q96CK0 615 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 CEP295NLQ96MC4 621 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 HERC2P3Q9BVR0 1158 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 COL25A1Q9BXS0 654 aaPredicted RBP10.9□□□□□ -0.66
MDC1-205ENST00000425072 PACSIN1Q9BY11 444 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 LRRC4Q9HBW1 653 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 CSNK1G1Q9HCP0 422 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 FNIP2Q9P278 1114 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 HSFX1Q9UBD0 423 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 MSRAQ9UJ68 235 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 DUSP10Q9Y6W6 482 aa10.9□□□□□ -0.66
MDC1-205ENST00000425072 MACROD2A1Z1Q3 448 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 SART1O43290 800 aaKnown RBP10.89□□□□□ -0.67
MDC1-205ENST00000425072 HCRTO43612 131 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 MTA2O94776 668 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 FBXO21O94952 628 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 CXCL14O95715 111 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 URODP06132 367 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 KRT3P12035 628 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 TNNT1P13805 278 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 CPB1P15086 417 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 DESP17661 470 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 BDNFP23560 247 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 RRM1P23921 792 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 GRIK1P39086 918 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 MAGEA11P43364 429 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 PLA2G4AP47712 749 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 RPL34P49207 117 aaKnown RBP10.89□□□□□ -0.67
MDC1-205ENST00000425072 GSCP56915 257 aaPredicted RBP10.89□□□□□ -0.67
MDC1-205ENST00000425072 PDCLQ13371 301 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 PSMD5Q16401 504 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 EFHC1Q5JVL4 640 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 OR6B2Q6IFH4 312 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 PLEKHA7Q6IQ23 1121 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 SLC8B1Q6J4K2 584 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 PDE12Q6L8Q7 609 aaKnown RBP10.89□□□□□ -0.67
MDC1-205ENST00000425072 PMF1Q6P1K2 205 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 DCUN1D2Q6PH85 259 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 MMS22LQ6ZRQ5 1243 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 MON1BQ7L1V2 547 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms