RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 KIAA1841Q6NSI8 718 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 FUT10Q6P4F1 479 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 TRIM65Q6PJ69 517 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 ANKS3Q6ZW76 656 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 APTXQ7Z2E3 356 aaKnown RBP7.51□□□□□ -1.21
EPHA4-206ENST00000424339 TMCO2Q7Z6W1 182 aaPredicted RBP7.51□□□□□ -1.21
EPHA4-206ENST00000424339 RNF168Q8IYW5 571 aaPredicted RBP7.51□□□□□ -1.21
EPHA4-206ENST00000424339 PPP2R3CQ969Q6 453 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 NUP58Q9BVL2 599 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 VPS16Q9H269 839 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 MMRN2Q9H8L6 949 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 NGRNQ9NPE2 291 aaKnown RBP7.51□□□□□ -1.21
EPHA4-206ENST00000424339 TAB2Q9NYJ8 693 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 APEX2Q9UBZ4 518 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 PRG3Q9Y2Y8 225 aaPredicted RBP7.51□□□□□ -1.21
EPHA4-206ENST00000424339 TNRC18O15417 2968 aaPredicted RBP7.51□□□□□ -1.21
EPHA4-206ENST00000424339 ITIH6Q6UXX5 1313 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 LCHNA4D1U4 455 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 OR6C75A6NL08 312 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 GRXCR1A8MXD5 290 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 H3BNC9 293 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 CYB561D2O14569 222 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 LPXNO60711 386 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 CLSTN1O94985 981 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 OAZ2O95190 189 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 VNN1O95497 513 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 ADCY5O95622 1261 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 EFEMP2O95967 443 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 CST3P01034 146 aaPredicted RBP7.5□□□□□ -1.21
EPHA4-206ENST00000424339 URODP06132 367 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 PON1P27169 355 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 PCSK1P29120 753 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 GLUD2P49448 558 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 MFAP3P55082 362 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 MYL6P60660 151 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 YWHAHQ04917 246 aaPredicted RBP7.5□□□□□ -1.21
EPHA4-206ENST00000424339 TRIM14Q14142 442 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 NR1I3Q14994 352 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 MAPRE1Q15691 268 aaKnown RBP7.5□□□□□ -1.21
EPHA4-206ENST00000424339 FIGNQ5HY92 759 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 ZNF280DQ6N043 979 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 ELMSAN1Q6PJG2 1045 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 DSTYKQ6XUX3 929 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 LIMS2Q7Z4I7 341 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 UNC93AQ86WB7 457 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 THEM5Q8N1Q8 247 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 KLHL23Q8NBE8 558 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 LMO3Q8TAP4 145 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 PIK3R5Q8WYR1 880 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 TNIP3Q96KP6 325 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 SENP8Q96LD8 212 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 TTPALQ9BTX7 342 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 HERC2P3Q9BVR0 1158 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 BCO2Q9BYV7 579 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 EDEM3Q9BZQ6 932 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 INTS2Q9H0H0 1204 aaKnown RBP7.5□□□□□ -1.21
EPHA4-206ENST00000424339 CXCL16Q9H2A7 254 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 NKX2-4Q9H2Z4 354 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 ZNF576Q9H609 170 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 TLR9Q9NR96 1032 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 MRPL17Q9NRX2 175 aaKnown RBP7.5□□□□□ -1.21
EPHA4-206ENST00000424339 CHST7Q9NS84 486 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 MARCH5Q9NX47 278 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 LMCD1Q9NZU5 365 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 MAFFQ9ULX9 164 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 MYO6Q9UM54 1294 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 YBX2Q9Y2T7 364 aaKnown RBP7.5□□□□□ -1.21
EPHA4-206ENST00000424339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.5□□□□□ -1.21
EPHA4-206ENST00000424339 SNX9Q9Y5X1 595 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 IRAK3Q9Y616 596 aa7.5□□□□□ -1.21
EPHA4-206ENST00000424339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.5□□□□□ -1.21
EPHA4-206ENST00000424339 GABRDO14764 452 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 B4GALT3O60512 393 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 TPM1P09493 284 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 CCDC172P0C7W6 258 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 CTSAP10619 480 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 WARSP23381 471 aaKnown RBP7.49□□□□□ -1.21
EPHA4-206ENST00000424339 GUCY2FP51841 1108 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 DSG1Q02413 1049 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 INCA1Q0VD86 236 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 CUL2Q13617 745 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 SMC1AQ14683 1233 aaKnown RBP7.49□□□□□ -1.21
EPHA4-206ENST00000424339 SYCP1Q15431 976 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 TIGD5Q53EQ6 642 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 FAM171A1Q5VUB5 890 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 OVOS1Q6IE37 1185 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 RTL10Q7L3V2 364 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 ADGRF2Q8IZF7 708 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 VPS52Q8N1B4 723 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 MICALL1Q8N3F8 863 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 PPM1KQ8N3J5 372 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 C3orf58Q8NDZ4 430 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 NEK11Q8NG66 645 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 SEMA4DQ92854 862 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 TP53INP1Q96A56 240 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 MRFAP1L1Q96HT8 127 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 CALR3Q96L12 384 aaKnown RBP7.49□□□□□ -1.21
EPHA4-206ENST00000424339 MMS19Q96T76 1030 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 PAAF1Q9BRP4 392 aa7.49□□□□□ -1.21
EPHA4-206ENST00000424339 EMILIN2Q9BXX0 1053 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms