RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 DNAJC17Q9NVM6 304 aaKnown RBP11.2□□□□□ -0.62
PTCH1-206ENST00000421141 CYP3A7-CYP3A51PA0A087WV96 503 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 ANXA9O76027 345 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 CYP3A7P24462 503 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 MYL6P60660 151 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 NOL9Q5SY16 702 aaKnown RBP11.2□□□□□ -0.62
PTCH1-206ENST00000421141 ANKS3Q6ZW76 656 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 HELQQ8TDG4 1101 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 ACSF2Q96CM8 615 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-206ENST00000421141 ADGRE3Q9BY15 652 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 TKTL1P51854 596 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 PTK2BQ14289 1009 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 NR1I3Q14994 352 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 UGP2Q16851 508 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 PTRHD1Q6GMV3 140 aaKnown RBP11.2□□□□□ -0.62
PTCH1-206ENST00000421141 MAML3Q96JK9 1138 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 FGBP02675 491 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 EIF2B5Q13144 721 aaKnown RBP11.2□□□□□ -0.62
PTCH1-206ENST00000421141 SLC39A12Q504Y0 691 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 FASTKD1Q53R41 847 aaKnown RBP11.2□□□□□ -0.62
PTCH1-206ENST00000421141 RASGRP2Q7LDG7 609 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 RAB6BQ9NRW1 208 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 PYCARDQ9ULZ3 195 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 ST3GAL5Q9UNP4 418 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
PTCH1-206ENST00000421141 ALDH1A2O94788 518 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 TRIM65Q6PJ69 517 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 DSG4Q86SJ6 1040 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 PTPRN2Q92932 1015 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 FGD4Q96M96 766 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 SNCAIPQ9Y6H5 919 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 N4BP2Q86UW6 1770 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-206ENST00000421141 RHOCP08134 193 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 SLCO1A2P46721 670 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 PSMC6P62333 389 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 SF3A3Q12874 501 aaKnown RBP eCLIP11.2□□□□□ -0.62
PTCH1-206ENST00000421141 ORC1Q13415 861 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 ART3Q13508 389 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 UGT3A1Q6NUS8 523 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 DCLK3Q9C098 648 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 VPS11Q9H270 941 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 EVA1BQ9NVM1 165 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 AIPL1Q9NZN9 384 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 TRIM33Q9UPN9 1127 aa11.2□□□□□ -0.62
PTCH1-206ENST00000421141 ZNF500O60304 480 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-206ENST00000421141 GRIN1Q05586 938 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 RNF217Q8TC41 542 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 C1orf54Q8WWF1 131 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 TRAIPQ9BWF2 469 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 CAPS2Q9BXY5 557 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 AGXT2Q9BYV1 514 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 NSMCE4AQ9NXX6 385 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 FAM187AA6NFU0 413 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 ADIGQ0VDE8 80 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 PDIA2Q13087 525 aaKnown RBP11.19□□□□□ -0.62
PTCH1-206ENST00000421141 LBX2Q6XYB7 198 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 ENGASEQ8NFI3 743 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 USP33Q8TEY7 942 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 INTUQ9ULD6 942 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 ROBO3Q96MS0 1386 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 MEIS2O14770 477 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 PSTPIP1O43586 416 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 FGF19O95750 216 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 PRKCQQ04759 706 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 PRKCZQ05513 592 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 BYSLQ13895 437 aaKnown RBP11.19□□□□□ -0.62
PTCH1-206ENST00000421141 CLEC17AQ6ZS10 378 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 GPATCH11Q8N954 259 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 XPO7Q9UIA9 1087 aaKnown RBP11.19□□□□□ -0.62
PTCH1-206ENST00000421141 CD52P31358 61 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 CDR2Q01850 454 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 PTPN11Q06124 597 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-206ENST00000421141 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 NFKBIZQ9BYH8 718 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 LATS2Q9NRM7 1088 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 PAK5Q9P286 719 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 PACSIN2Q9UNF0 486 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-206ENST00000421141 GIT1Q9Y2X7 761 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 STRCP1A6NGW2 1772 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 CASP4P49662 377 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 PDK2Q15119 407 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 KCTD16Q68DU8 428 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 EMBQ6PCB8 327 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 IPMKQ8NFU5 416 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 TIMM13Q9Y5L4 95 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-206ENST00000421141 PHF20L1A8MW92 1017 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 NDST1P52848 882 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 TBX4P57082 545 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 TAF11Q15544 211 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 GIPC2Q8TF65 315 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 UBE2OQ9C0C9 1292 aaKnown RBP11.19□□□□□ -0.62
PTCH1-206ENST00000421141 NFU1Q9UMS0 254 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 MRPS23Q9Y3D9 190 aaKnown RBP11.19□□□□□ -0.62
PTCH1-206ENST00000421141 UBIAD1Q9Y5Z9 338 aa11.19□□□□□ -0.62
PTCH1-206ENST00000421141 GTPBP10A4D1E9 387 aaKnown RBP11.18□□□□□ -0.62
PTCH1-206ENST00000421141 PTGER2P43116 358 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 ZBED8Q8IZ13 594 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 PPM1NQ8N819 430 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 SALL3Q9BXA9 1300 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms