RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 FDXACB1Q9BRP7 624 aaPredicted RBP8.8□□□□□ -1
UBR4-206ENST00000419533 ZNF518BQ9C0D4 1074 aa8.8□□□□□ -1
UBR4-206ENST00000419533 MRPL46Q9H2W6 279 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 AMACRQ9UHK6 382 aa8.8□□□□□ -1
UBR4-206ENST00000419533 TBKBP1A7MCY6 615 aa8.8□□□□□ -1
UBR4-206ENST00000419533 HNRNPCL2B2RXH8 293 aa8.8□□□□□ -1
UBR4-206ENST00000419533 HNRNPCL1O60812 293 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 HAUS5O94927 633 aa8.8□□□□□ -1
UBR4-206ENST00000419533 LMNAP02545 664 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 POLBP06746 335 aa8.8□□□□□ -1
UBR4-206ENST00000419533 INSRRP14616 1297 aa8.8□□□□□ -1
UBR4-206ENST00000419533 ABCE1P61221 599 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 MTA1Q13330 715 aa8.8□□□□□ -1
UBR4-206ENST00000419533 USP10Q14694 798 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 SEC23AQ15436 765 aa8.8□□□□□ -1
UBR4-206ENST00000419533 RASAL3Q86YV0 1011 aa8.8□□□□□ -1
UBR4-206ENST00000419533 LRRC43Q8N309 656 aa8.8□□□□□ -1
UBR4-206ENST00000419533 SPATA4Q8NEY3 305 aa8.8□□□□□ -1
UBR4-206ENST00000419533 EMILIN2Q9BXX0 1053 aa8.8□□□□□ -1
UBR4-206ENST00000419533 ITGA11Q9UKX5 1188 aa8.8□□□□□ -1
UBR4-206ENST00000419533 ESYT3A0FGR9 886 aa8.8□□□□□ -1
UBR4-206ENST00000419533 CHUKO15111 745 aa8.8□□□□□ -1
UBR4-206ENST00000419533 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 GUCY2CP25092 1073 aa8.8□□□□□ -1
UBR4-206ENST00000419533 AVPR1AP37288 418 aa8.8□□□□□ -1
UBR4-206ENST00000419533 GYS2P54840 703 aa8.8□□□□□ -1
UBR4-206ENST00000419533 SMAD1Q15797 465 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 AMHR2Q16671 573 aa8.8□□□□□ -1
UBR4-206ENST00000419533 LY6KQ17RY6 165 aa8.8□□□□□ -1
UBR4-206ENST00000419533 NECAB2Q7Z6G3 386 aa8.8□□□□□ -1
UBR4-206ENST00000419533 TFB1MQ8WVM0 346 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 OSMRQ99650 979 aa8.8□□□□□ -1
UBR4-206ENST00000419533 FRMD8Q9BZ67 464 aaPredicted RBP8.8□□□□□ -1
UBR4-206ENST00000419533 FRMD8P1Q9BZ68 369 aaPredicted RBP8.8□□□□□ -1
UBR4-206ENST00000419533 AGPAT5Q9NUQ2 364 aa8.8□□□□□ -1
UBR4-206ENST00000419533 FRMD3A2A2Y4 597 aa8.8□□□□□ -1
UBR4-206ENST00000419533 CCDC22O60826 627 aa8.8□□□□□ -1
UBR4-206ENST00000419533 AOC2O75106 756 aa8.8□□□□□ -1
UBR4-206ENST00000419533 SPAG7O75391 227 aa8.8□□□□□ -1
UBR4-206ENST00000419533 ASS1P00966 412 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 COMTP21964 271 aa8.8□□□□□ -1
UBR4-206ENST00000419533 SPRP35270 261 aaPredicted RBP8.8□□□□□ -1
UBR4-206ENST00000419533 GEMP55040 296 aa8.8□□□□□ -1
UBR4-206ENST00000419533 VCPP55072 806 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 ACVR2BQ13705 512 aa8.8□□□□□ -1
UBR4-206ENST00000419533 SPDYE7PQ495Y7 208 aa8.8□□□□□ -1
UBR4-206ENST00000419533 TMCO4Q5TGY1 634 aa8.8□□□□□ -1
UBR4-206ENST00000419533 TIGD7Q6NT04 549 aaPredicted RBP8.8□□□□□ -1
UBR4-206ENST00000419533 ACOT1Q86TX2 421 aa8.8□□□□□ -1
UBR4-206ENST00000419533 ZNF410Q86VK4 478 aa8.8□□□□□ -1
UBR4-206ENST00000419533 REPS2Q8NFH8 660 aa8.8□□□□□ -1
UBR4-206ENST00000419533 TGS1Q96RS0 853 aaKnown RBP8.8□□□□□ -1
UBR4-206ENST00000419533 FAM129AQ9BZQ8 928 aa8.8□□□□□ -1
UBR4-206ENST00000419533 C20orf96Q9NUD7 363 aaPredicted RBP8.8□□□□□ -1
UBR4-206ENST00000419533 TEKT2Q9UIF3 430 aa8.8□□□□□ -1
UBR4-206ENST00000419533 CRLS1Q9UJA2 301 aa8.8□□□□□ -1
UBR4-206ENST00000419533 GPR25O00155 361 aa8.79□□□□□ -1
UBR4-206ENST00000419533 SUPT3HO75486 399 aa8.79□□□□□ -1
UBR4-206ENST00000419533 FDFT1P37268 417 aa8.79□□□□□ -1
UBR4-206ENST00000419533 FOXD4Q12950 439 aaPredicted RBP8.79□□□□□ -1
UBR4-206ENST00000419533 GIT2Q14161 759 aa8.79□□□□□ -1
UBR4-206ENST00000419533 GRIK5Q16478 980 aa8.79□□□□□ -1
UBR4-206ENST00000419533 SEZ6Q53EL9 994 aa8.79□□□□□ -1
UBR4-206ENST00000419533 GPR142Q7Z601 462 aa8.79□□□□□ -1
UBR4-206ENST00000419533 FBXL5Q9UKA1 691 aa8.79□□□□□ -1
UBR4-206ENST00000419533 CST8O60676 142 aa8.79□□□□□ -1
UBR4-206ENST00000419533 PSEN2P49810 448 aa8.79□□□□□ -1
UBR4-206ENST00000419533 MYBPC2Q14324 1141 aa8.79□□□□□ -1
UBR4-206ENST00000419533 FSCN1Q16658 493 aaKnown RBP8.79□□□□□ -1
UBR4-206ENST00000419533 ZRANB3Q5FWF4 1079 aa8.79□□□□□ -1
UBR4-206ENST00000419533 UGT3A1Q6NUS8 523 aa8.79□□□□□ -1
UBR4-206ENST00000419533 PKN3Q6P5Z2 889 aa8.79□□□□□ -1
UBR4-206ENST00000419533 RRM2BQ7LG56 351 aa8.79□□□□□ -1
UBR4-206ENST00000419533 LCA5Q86VQ0 697 aa8.79□□□□□ -1
UBR4-206ENST00000419533 TRIM48Q8IWZ4 208 aa8.79□□□□□ -1
UBR4-206ENST00000419533 ERGIC2Q96RQ1 377 aa8.79□□□□□ -1
UBR4-206ENST00000419533 RBM15Q96T37 977 aaKnown RBP eCLIP8.79□□□□□ -11e-6■■□□□ 13.7
UBR4-206ENST00000419533 STX18Q9P2W9 335 aaKnown RBP8.79□□□□□ -1
UBR4-206ENST00000419533 GTF3C4Q9UKN8 822 aa8.79□□□□□ -1
UBR4-206ENST00000419533 NEU2Q9Y3R4 380 aa8.79□□□□□ -1
UBR4-206ENST00000419533 MRFAP1Q9Y605 127 aa8.79□□□□□ -1
UBR4-206ENST00000419533 WTIPA6NIX2 430 aaPredicted RBP8.79□□□□□ -1
UBR4-206ENST00000419533 RPSAP08865 295 aaKnown RBP8.79□□□□□ -1
UBR4-206ENST00000419533 EIF2B5Q13144 721 aaKnown RBP8.79□□□□□ -1
UBR4-206ENST00000419533 PTGISQ16647 500 aa8.79□□□□□ -1
UBR4-206ENST00000419533 RASGRP2Q7LDG7 609 aa8.79□□□□□ -1
UBR4-206ENST00000419533 CBWD2Q8IUF1 395 aa8.79□□□□□ -1
UBR4-206ENST00000419533 GRAMD1AQ96CP6 724 aa8.79□□□□□ -1
UBR4-206ENST00000419533 CHST12Q9NRB3 414 aa8.79□□□□□ -1
UBR4-206ENST00000419533 CD274Q9NZQ7 290 aa8.79□□□□□ -1
UBR4-206ENST00000419533 SELENONQ9NZV5 590 aa8.79□□□□□ -1
UBR4-206ENST00000419533 SMG5Q9UPR3 1016 aaKnown RBP8.79□□□□□ -1
UBR4-206ENST00000419533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.79□□□□□ -1
UBR4-206ENST00000419533 PCDHAC2Q9Y5I4 1007 aa8.79□□□□□ -1
UBR4-206ENST00000419533 MROH7Q68CQ1 1323 aa8.79□□□□□ -1
UBR4-206ENST00000419533 STX7O15400 261 aaKnown RBP8.79□□□□□ -1
UBR4-206ENST00000419533 PSTPIP1O43586 416 aa8.79□□□□□ -1
UBR4-206ENST00000419533 SLC10A3P09131 477 aa8.79□□□□□ -1
UBR4-206ENST00000419533 GGCXP38435 758 aa8.79□□□□□ -1
UBR4-206ENST00000419533 OXCT1P55809 520 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms