RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 FGF18O76093 207 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 MOCS3O95396 460 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 GJB6O95452 261 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 BST2Q10589 180 aaKnown RBP10.24□□□□□ -0.77
RIF1-202ENST00000414861 USP41Q3LFD5 358 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 CLEC20AQ6ZU45 233 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 DDX53Q86TM3 631 aaKnown RBP10.24□□□□□ -0.77
RIF1-202ENST00000414861 TTC9BQ8N6N2 239 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 KLHL23Q8NBE8 558 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 ZMIZ2Q8NF64 920 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 AUTS2Q8WXX7 1259 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 C17orf80Q9BSJ5 609 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 HERC2P3Q9BVR0 1158 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 TSGA10Q9BZW7 698 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 UBE2OQ9C0C9 1292 aaKnown RBP10.24□□□□□ -0.77
RIF1-202ENST00000414861 MYO1AQ9UBC5 1043 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 PCDHB12Q9Y5F1 795 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 GOLGA6L9A6NEM1 432 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 E5RJQ4 531 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 AP1G2O75843 785 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 VNN2O95498 520 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 CA3P07451 260 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 NPR3P17342 541 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 BDNFP23560 247 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 CTNNB1P35222 781 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 PPM1AP35813 382 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 C1QBPQ07021 282 aaKnown RBP10.23□□□□□ -0.77
RIF1-202ENST00000414861 PSMD5Q16401 504 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 ANKS3Q6ZW76 656 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 VPS52Q8N1B4 723 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 PIK3R5Q8WYR1 880 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 RFFLQ8WZ73 363 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 PIWIL1Q96J94 861 aaKnown RBP10.23□□□□□ -0.77
RIF1-202ENST00000414861 PGLYRP2Q96PD5 576 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 WDR24Q96S15 920 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 KCNK16Q96T55 309 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 SMOQ99835 787 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 DUSP16Q9BY84 665 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 TRIM7Q9C029 511 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 DNAI2Q9GZS0 605 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 ST7Q9NRC1 585 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 AAASQ9NRG9 546 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 MTRRQ9UBK8 725 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 CNOT8Q9UFF9 292 aaKnown RBP10.23□□□□□ -0.77
RIF1-202ENST00000414861 MTUS1Q9ULD2 1270 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 ATG2AQ2TAZ0 1938 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 OR6C75A6NL08 312 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 CYP1A2P05177 515 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 FAM200BP0CF97 657 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 DNAJB2P25686 324 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 PBX2P40425 430 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 ARPP19P56211 112 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 MAP3K7CLP57077 242 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 GPC5P78333 572 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 DSG1Q02413 1049 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 PIGZQ86VD9 579 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 ERICH1Q86X53 443 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 SLC35G2Q8TBE7 412 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 SMARCD1Q96GM5 515 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 GOLPH3Q9H4A6 298 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 RRAGDQ9NQL2 400 aaPredicted RBP10.23□□□□□ -0.77
RIF1-202ENST00000414861 ABI2Q9NYB9 513 aaPredicted RBP10.23□□□□□ -0.77
RIF1-202ENST00000414861 YBX2Q9Y2T7 364 aaKnown RBP10.23□□□□□ -0.77
RIF1-202ENST00000414861 CDY1Q9Y6F8 540 aa10.23□□□□□ -0.77
RIF1-202ENST00000414861 MYO16Q9Y6X6 1858 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 TRANK1O15050 2925 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 TCRBV5S1A1TA0A578 114 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 BTNL10A8MVZ5 291 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 CSPG5O95196 566 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 SETSIPP0DME0 302 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 CPB1P15086 417 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 CYP2F1P24903 491 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 PLA2G4AP47712 749 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 GLUD2P49448 558 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 KIAA1841Q6NSI8 718 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 GPRIN1Q7Z2K8 1008 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 XYLT1Q86Y38 959 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 NUP85Q9BW27 656 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 SLC4A5Q9BY07 1137 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 CRISPLD1Q9H336 500 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 ZNF638Q14966 1978 aaKnown RBP10.22□□□□□ -0.77
RIF1-202ENST00000414861 GREB1Q4ZG55 1949 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 A0A0A6YYK5 440 aaPredicted RBP10.22□□□□□ -0.77
RIF1-202ENST00000414861 WDR27A2RRH5 827 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 GRID2IPA4D2P6 1211 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 H7C4K7 107 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 XPO1O14980 1071 aaKnown RBP10.22□□□□□ -0.77
RIF1-202ENST00000414861 CALB1P05937 261 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 BMPR1AP36894 532 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 ROR1Q01973 937 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 MAMLD1Q13495 774 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 PTPN14Q15678 1187 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 MAPRE1Q15691 268 aaKnown RBP10.22□□□□□ -0.77
RIF1-202ENST00000414861 SLC8B1Q6J4K2 584 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 RNF19BQ6ZMZ0 732 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 SPATA2LQ8IUW3 424 aaPredicted RBP10.22□□□□□ -0.77
RIF1-202ENST00000414861 TXLNBQ8N3L3 684 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 ATAD1Q8NBU5 361 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 FBXO22Q8NEZ5 403 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 CLEC4CQ8WTT0 213 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms