RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PAX3P23760 479 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 ADORA2BP29275 332 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 CORO7P57737 925 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 CENPCQ03188 943 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 GOLGA7BQ2TAP0 167 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 VARS2Q5ST30 1063 aaKnown RBP16.42■□□□□ 0.22
SHMT2-202ENST00000414700 SLC39A11Q8N1S5 342 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 ZNF558Q96NG5 402 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 TMLHEQ9NVH6 421 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 TJP2Q9UDY2 1190 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 DSEQ9UL01 958 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 NLRC5Q86WI3 1866 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 SZT2Q5T011 3432 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 TLL1O43897 1013 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 RTN2O75298 545 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 ERLIN1O75477 346 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 MYOGP15173 224 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 FGFR3P22607 806 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 BEND6Q5SZJ8 279 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-202ENST00000414700 SMYD5Q6GMV2 418 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 ACAD10Q6JQN1 1059 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 LCLAT1Q6UWP7 414 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 PAQR9Q6ZVX9 377 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 PHLDB2Q86SQ0 1253 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 FUKQ8N0W3 1084 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 ARHGEF26Q96DR7 871 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 PCED1BQ96HM7 432 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 RAD9AQ99638 391 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 ACBD6Q9BR61 282 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 RHOBTB2Q9BYZ6 727 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 KIAA1257Q9ULG3 409 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 GUCA1BQ9UMX6 200 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 PTPRDP23468 1912 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 MYO7AQ13402 2215 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 PLXNA4Q9HCM2 1894 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 SYN3O14994 580 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 ARHGEF15O94989 841 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 OAZ2O95190 189 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 H2AFZP0C0S5 128 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 CDH5P33151 784 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-202ENST00000414700 GPD2P43304 727 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 TUBB4BP68371 445 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 PKDCCQ504Y2 493 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 H2AFVQ71UI9 128 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 RNF168Q8IYW5 571 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-202ENST00000414700 FIBCD1Q8N539 461 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 PHOSPHO2Q8TCD6 241 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 PKMYT1Q99640 499 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 TMEM30AQ9NV96 361 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 RAB21Q9UL25 225 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 CDH9Q9ULB4 789 aa16.41■□□□□ 0.22
SHMT2-202ENST00000414700 REV3LO60673 3130 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 MACROD2A1Z1Q3 448 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 PJA2O43164 708 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 CPP00450 1065 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 LAG3P18627 525 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 PCSK1P29120 753 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 NSFP46459 744 aaKnown RBP16.4■□□□□ 0.22
SHMT2-202ENST00000414700 KIF5AQ12840 1032 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 MRPL58Q14197 206 aaKnown RBP16.4■□□□□ 0.22
SHMT2-202ENST00000414700 INTS6LQ5JSJ4 861 aaKnown RBP16.4■□□□□ 0.22
SHMT2-202ENST00000414700 ARHGAP17Q68EM7 881 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 PRSS55Q6UWB4 352 aaPredicted RBP16.4■□□□□ 0.22
SHMT2-202ENST00000414700 RSPO2Q6UXX9 243 aaPredicted RBP16.4■□□□□ 0.22
SHMT2-202ENST00000414700 TRIM72Q6ZMU5 477 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 MSANTD4Q8NCY6 345 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 SECISBP2LQ93073 1101 aaKnown RBP16.4■□□□□ 0.22
SHMT2-202ENST00000414700 RNPC3Q96LT9 517 aaKnown RBP16.4■□□□□ 0.22
SHMT2-202ENST00000414700 C11orf70Q9BRQ4 267 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 B3GNT5Q9BYG0 378 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 LHX5Q9H2C1 402 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 BEST1O76090 585 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 CACNA2D1P54289 1103 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 PTP4A2Q12974 167 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 PTPN20Q4JDL3 420 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 C10orf76Q5T2E6 689 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 FAM171BQ6P995 826 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 MMS22LQ6ZRQ5 1243 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 MON1BQ7L1V2 547 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 MCOLN2Q8IZK6 566 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 THEM5Q8N1Q8 247 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 TMEM35BQ8NCS4 154 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 SPATA18Q8TC71 538 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 SP7Q8TDD2 431 aaPredicted RBP16.4■□□□□ 0.22
SHMT2-202ENST00000414700 CLP1Q92989 425 aaKnown RBP16.4■□□□□ 0.22
SHMT2-202ENST00000414700 TMEM169Q96HH4 297 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 CPXM1Q96SM3 734 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 ZNF518BQ9C0D4 1074 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 ANKZF1Q9H8Y5 726 aa16.4■□□□□ 0.22
SHMT2-202ENST00000414700 ARHGEF37A1IGU5 675 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 ANKRD62A6NC57 917 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 PIK3R2O00459 728 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 C2CD2LO14523 706 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 BUB1O43683 1085 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 LSM8O95777 96 aaKnown RBP16.39■□□□□ 0.21
SHMT2-202ENST00000414700 PMF1Q6P1K2 205 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 FOXR1Q6PIV2 292 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 SUGP1Q8IWZ8 645 aaKnown RBP16.39■□□□□ 0.21
SHMT2-202ENST00000414700 CEP112Q8N8E3 955 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 MYCBPAPQ8TBZ2 947 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms