RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 ABCA6Q8N139 1617 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TMEM94Q12767 1356 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 DCCP43146 1447 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RPRD2Q5VT52 1461 aaKnown RBP3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 FYCO1Q9BQS8 1478 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SLIT1O75093 1534 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GPATCH8Q9UKJ3 1502 aaKnown RBP3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 HMGB1P1B2RPK0 211 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 E7ENX8 843 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 IFRD1O00458 451 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 APAF1O14727 1248 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ORC4O43929 436 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 FAM20BO75063 409 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 AMY1AP04745 511 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ANXA2P07355 339 aaKnown RBP3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GRPP07492 148 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 KITP10721 976 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CKBP12277 381 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MYL4P12829 197 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ITGALP20701 1170 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PCSK1P29120 753 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LRPAP1P30533 357 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 VIPR2P41587 438 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TECP42680 631 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 STT3AP46977 705 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 HNRNPMP52272 730 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ADAM8P78325 824 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TNFAIP2Q03169 654 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TAP2Q03519 686 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ICA1Q05084 483 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 DGKKQ5KSL6 1271 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TEDDM1Q5T9Z0 273 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 HECTD2Q5U5R9 776 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 IZUMO3Q5VZ72 239 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 FAM160B1Q5W0V3 765 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 FBXO38Q6PIJ6 1188 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 APOA5Q6Q788 366 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 COLGALT2Q8IYK4 626 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MPP5Q8N3R9 675 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 OR2C3Q8N628 320 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LILRA3Q8N6C8 439 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MB21D1Q8N884 522 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 REPS2Q8NFH8 660 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TBC1D15Q8TC07 691 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SLC25A43Q8WUT9 341 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LRFN3Q9BTN0 628 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TRIM54Q9BYV2 358 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GPR35Q9HC97 309 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SACM1LQ9NTJ5 587 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZNF212Q9UDV6 495 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 EIF2B4Q9UI10 523 aaKnown RBP3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TRPC5Q9UL62 973 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PCDHA6Q9UN73 950 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CORO2BQ9UQ03 480 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PCDHGB6Q9Y5F9 930 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NOX1Q9Y5S8 564 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MTUS2Q5JR59 1369 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TMEM2Q9UHN6 1383 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 EP400Q96L91 3159 aa3.1□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PRDM15P57071 1507 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PREX2Q70Z35 1606 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ARHGEF17Q96PE2 2063 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GAGE12BA1L429 117 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GRID2IPA4D2P6 1211 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CDHR4A6H8M9 788 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GAGE12HA6NDE8 117 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 AQP7P3A6NL99 342 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NT5C1B-RDH14C9J2C7 533 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 F5H423 210 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 M0QYG6 137 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 APOL1O14791 398 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NPHP1O15259 732 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SKAP2O75563 359 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RASSF9O75901 435 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MYL3P08590 195 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MYBP10242 640 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 FPR1P21462 350 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CCT5P48643 541 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CASP5P51878 434 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZNF135P52742 658 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SUMO3P55854 103 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 POLE2P56282 527 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LOXL3P58215 753 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CHAF1AQ13111 956 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 STK3Q13188 491 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TOB2Q14106 344 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 STARD3Q14849 445 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MFSD14BQ5SR56 506 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LY6G5CQ5SRR4 150 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 UTP14CQ5TAP6 766 aaKnown RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ARL6IP4Q66PJ3 421 aaKnown RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NAIF1Q69YI7 327 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 FBXO42Q6P3S6 717 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 Q6ZRM9 215 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CLNKQ7Z7G1 428 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TTC30AQ86WT1 665 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RHOT2Q8IXI1 618 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SPICE1Q8N0Z3 855 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SYNE4Q8N205 404 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms