RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TAF5Q15542 800 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ZBED8Q8IZ13 594 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 BCO2Q9BYV7 579 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ELOVL4Q9GZR5 314 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 PIK3R2O00459 728 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 C22orf31O95567 290 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GCAP28676 217 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 RNASEH2BQ5TBB1 312 aaKnown RBP19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 XYLT1Q86Y38 959 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ANKRD13AQ8IZ07 590 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 NKD2Q969F2 451 aaPredicted RBP19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SPDL1Q96EA4 605 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CFAP57Q96MR6 1250 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 LHX5Q9H2C1 402 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CPSF2Q9P2I0 782 aaKnown RBP19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CXCL11O14625 94 aa19.27■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MED7O43513 233 aa19.27■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ITGAVP06756 1048 aa19.27■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PTPN7P35236 360 aa19.27■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SLC35B2Q8TB61 432 aa19.27■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ITFG2Q969R8 447 aa19.27■□□□□ 0.67
CHRFAM7A-202ENST00000397827 VPS37BQ9H9H4 285 aa19.27■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ABCF3Q9NUQ8 709 aa19.27■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SPDYE5A6NIY4 337 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 VTNP04004 478 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 STX2P32856 288 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SLC26A2P50443 739 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PTPN11Q06124 597 aaPredicted RBP19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 TTLL4Q14679 1199 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FAM182AQ5T1J6 154 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CYB5D1Q6P9G0 228 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 POLNQ7Z5Q5 900 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CKAP2Q8WWK9 683 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MAML1Q92585 1016 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 IRAK4Q9NWZ3 460 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ERAP1Q9NZ08 941 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SPAG7O75391 227 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MICAL2O94851 1124 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 IL18RAPO95256 599 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PDIA2Q13087 525 aaKnown RBP19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MOGSQ13724 837 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MORF4L2Q15014 288 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FAM133BQ5BKY9 247 aaKnown RBP19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ANKMY2Q8IV38 441 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 UBA3Q8TBC4 463 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MICAL1Q8TDZ2 1067 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FOXP3Q9BZS1 431 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 AKT3Q9Y243 479 aa19.26■□□□□ 0.67
CHRFAM7A-202ENST00000397827 KDELR1P24390 212 aa19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 TRPM8Q7Z2W7 1104 aa19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 HSPH1Q92598 858 aa19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 OPTNQ96CV9 577 aa19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PCDH9Q9HC56 1237 aa19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 M0QYV0 167 aa19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PIAS1O75925 651 aa19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ABHD2P08910 425 aa19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CXorf38Q8TB03 319 aa19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PRCCQ92733 491 aaPredicted RBP19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 P3H4Q92791 437 aa19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 THOC1Q96FV9 657 aaKnown RBP19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 TGS1Q96RS0 853 aaKnown RBP19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PAIP2Q9BPZ3 127 aaKnown RBP19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PRMT7Q9NVM4 692 aaPredicted RBP19.25■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CILPO75339 1184 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 KRT7P08729 469 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CYP2C8P10632 490 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 NRLP54845 237 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 AMHR2Q16671 573 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 HADHQ16836 314 aaKnown RBP19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ANKRD22Q5VYY1 191 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 TMEM176AQ96HP8 235 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PDZD7Q9H5P4 517 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 NKIRAS1Q9NYS0 192 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 GHRP10912 638 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MIPP30301 263 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PHKA2P46019 1235 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CTCFP49711 727 aaPredicted RBP19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MYO1EQ12965 1108 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SLC10A6Q3KNW5 377 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 RAB6CQ53S08 254 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SH3PXD2AQ5TCZ1 1133 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ARMCX2Q7L311 632 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FUKQ8N0W3 1084 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 HEXIM2Q96MH2 286 aaKnown RBP19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 RAB6CQ9H0N0 254 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 KCNH4Q9UQ05 1017 aa19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 USP15Q9Y4E8 981 aaPredicted RBP19.24■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ENO4A6NNW6 628 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 OAS1P00973 400 aaKnown RBP19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 LGALS2P05162 132 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ZNF286BP0CG31 522 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ARF4P18085 180 aaPredicted RBP19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ARHGAP1Q07960 439 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PKN2Q16513 984 aaKnown RBP19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MAP1SQ66K74 1059 aaPredicted RBP19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ARHGEF18Q6ZSZ5 1173 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CEP128Q6ZU80 1094 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 KCTD6Q8NC69 237 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CDCA5Q96FF9 252 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CALN1Q9BXU9 219 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms