RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 KCNK3O14649 394 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 CILPO75339 1184 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 FGF18O76093 207 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 FTLP02792 175 aaPredicted RBP15.78■□□□□ 0.12
CAPN3-207ENST00000397200 TKTP29401 623 aaKnown RBP15.78■□□□□ 0.12
CAPN3-207ENST00000397200 PBX2P40425 430 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 LHX1P48742 406 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 KRT17Q04695 432 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 CASP8Q14790 479 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 DAAM2Q86T65 1068 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 CEP57Q86XR8 500 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 RBBP8NLQ8NC74 664 aaPredicted RBP15.78■□□□□ 0.12
CAPN3-207ENST00000397200 AENQ8WTP8 325 aaKnown RBP15.78■□□□□ 0.12
CAPN3-207ENST00000397200 PLVAPQ9BX97 442 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 PRO3102Q9H379 93 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 STIM2Q9P246 746 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 STK39Q9UEW8 545 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 DMGDHQ9UI17 866 aaKnown RBP15.78■□□□□ 0.12
CAPN3-207ENST00000397200 AMFRQ9UKV5 643 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 COG5Q9UP83 839 aa15.78■□□□□ 0.12
CAPN3-207ENST00000397200 A8MXQ7 604 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 DDX3YO15523 660 aaKnown RBP15.77■□□□□ 0.12
CAPN3-207ENST00000397200 ARHGEF15O94989 841 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 MYBL2P10244 700 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 ABCB4P21439 1286 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 FGFR3P22607 806 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 GNL1P36915 607 aaPredicted RBP15.77■□□□□ 0.12
CAPN3-207ENST00000397200 PDE6CP51160 858 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 NDST1P52848 882 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 GPC5P78333 572 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 USP41Q3LFD5 358 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 ZNF394Q53GI3 561 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 OVOS1Q6IE37 1185 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 C8orf74Q6P047 294 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 DDX53Q86TM3 631 aaKnown RBP15.77■□□□□ 0.12
CAPN3-207ENST00000397200 UNC93AQ86WB7 457 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 OSTM1Q86WC4 334 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 KLHL23Q8NBE8 558 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 SAMD11Q96NU1 681 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 TGS1Q96RS0 853 aaKnown RBP15.77■□□□□ 0.12
CAPN3-207ENST00000397200 C17orf80Q9BSJ5 609 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 TTPALQ9BTX7 342 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 SELENOOQ9BVL4 669 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 DNAI2Q9GZS0 605 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 SEPT11Q9NVA2 429 aaKnown RBP15.77■□□□□ 0.12
CAPN3-207ENST00000397200 HMGXB4Q9UGU5 601 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 CNTN6Q9UQ52 1028 aa15.77■□□□□ 0.12
CAPN3-207ENST00000397200 PLXNA4Q9HCM2 1894 aa15.77■□□□□ 0.11
CAPN3-207ENST00000397200 BHMG1C9JSJ3 638 aaPredicted RBP15.76■□□□□ 0.11
CAPN3-207ENST00000397200 PGRMC1O00264 195 aaKnown RBP15.76■□□□□ 0.11
CAPN3-207ENST00000397200 GABRDO14764 452 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 EFEMP2O95967 443 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 SOD2P04179 222 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 MMEP08473 750 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 PLCB3Q01970 1234 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 YWHAHQ04917 246 aaPredicted RBP15.76■□□□□ 0.11
CAPN3-207ENST00000397200 SMC1AQ14683 1233 aaKnown RBP15.76■□□□□ 0.11
CAPN3-207ENST00000397200 ZNF677Q86XU0 584 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 RNF168Q8IYW5 571 aaPredicted RBP15.76■□□□□ 0.11
CAPN3-207ENST00000397200 THEM5Q8N1Q8 247 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 HDAC7Q8WUI4 952 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 HERC2P3Q9BVR0 1158 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 VN1R3Q9BXE9 311 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 NT5C1AQ9BXI3 368 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 NKX2-4Q9H2Z4 354 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 DDX43Q9NXZ2 648 aaKnown RBP15.76■□□□□ 0.11
CAPN3-207ENST00000397200 MTUS1Q9ULD2 1270 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 CYP1A2P05177 515 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 PDGFRBP09619 1106 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 PCSK1P29120 753 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 ZNF132P52740 706 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 BPIFB4P59827 614 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 TAP1Q03518 808 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 ORC1Q13415 861 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 VARS2Q5ST30 1063 aaKnown RBP15.76■□□□□ 0.11
CAPN3-207ENST00000397200 KIAA1841Q6NSI8 718 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 TAS1R1Q7RTX1 841 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 WHAMMQ8TF30 809 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 TMEM176AQ96HP8 235 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 B3GALT6Q96L58 329 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 TWNKQ96RR1 684 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 ELOVL4Q9GZR5 314 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 CARD9Q9H257 536 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 GDF3Q9NR23 364 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 GTF3C4Q9UKN8 822 aa15.76■□□□□ 0.11
CAPN3-207ENST00000397200 C5orf67F2Z3F1 127 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 CCDC188H7C350 402 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 OAZ2O95190 189 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 RB1P06400 928 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 PAEPP09466 180 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 LMO2P25791 158 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 DNA2P51530 1060 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 RAD23BP54727 409 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 ERVK-21P61565 698 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 FAM193AP78312 1265 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 SMAD3P84022 425 aaKnown RBP15.75■□□□□ 0.11
CAPN3-207ENST00000397200 CLEC16AQ2KHT3 1053 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 RTP2Q5QGT7 225 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 PPP2R2DQ66LE6 453 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 ZNF280DQ6N043 979 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms