RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 COL4A3BPQ9Y5P4 624 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 COMMD3-BMI1R4GMX3 469 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 C2orf71A6NGG8 1288 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 EIF4E1BA6NMX2 242 aaKnown RBP12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 F8VZ95 297 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 C1RP00736 705 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TPBGLP0DKB5 382 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CCNB1P14635 433 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CYP11B2P19099 503 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 RAD23BP54727 409 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CCDC15Q0P6D6 951 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 HFE2Q6ZVN8 426 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PHC3Q8NDX5 983 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 IRGQQ8WZA9 623 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CEP170P1Q96L14 293 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MIS12Q9H081 205 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 VPS16Q9H269 839 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 NHEJ1Q9H9Q4 299 aaPredicted RBP12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 NKX1-2Q9UD57 310 aaPredicted RBP12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 RWDD2AQ9UIY3 292 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 FBXO2Q9UK22 296 aaPredicted RBP12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 DUSP10Q9Y6W6 482 aa12.05□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MACROD2A1Z1Q3 448 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MAGEA13PA6NCF6 341 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 O00370 1275 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PFDN1O60925 122 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 LYPLA2O95372 231 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CTSAP10619 480 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PSMD7P51665 324 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PTPN5P54829 565 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MXD4Q14582 209 aaPredicted RBP12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SYCE2Q6PIF2 218 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 ELMSAN1Q6PJG2 1045 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 UBALD2Q8IYN6 164 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 LRRC34Q8IZ02 419 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 IGSF21Q96ID5 467 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 GBP5Q96PP8 586 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MTRQ99707 1265 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 ZBP1Q9H171 429 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 RMND1Q9NWS8 449 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 DPP7Q9UHL4 492 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 RPL26L1Q9UNX3 145 aaKnown RBP12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 ZMYM2Q9UBW7 1377 aa12.04□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SMAPO00193 183 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SART1O43290 800 aaKnown RBP12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SLC37A4O43826 429 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SNX3O60493 162 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CCNT1O60563 726 aaKnown RBP12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CLASP2O75122 1294 aaKnown RBP12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PEX11AO75192 247 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 EIF3BP55884 814 aaKnown RBP12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 UBXN1Q04323 297 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 RNASELQ05823 741 aaKnown RBP12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TFDP1Q14186 410 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 FKBP15Q5T1M5 1219 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MFSD4BQ5TF39 518 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 KLHL10Q6JEL2 608 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CEP128Q6ZU80 1094 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 HACE1Q8IYU2 909 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 FBXL6Q8N531 539 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PBXIP1Q96AQ6 731 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 ZNF653Q96CK0 615 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 NLRP4Q96MN2 994 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 ELAC2Q9BQ52 826 aaKnown RBP12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CORO1BQ9BR76 489 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CARD9Q9H257 536 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 IFT122Q9HBG6 1241 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 FAM114A2Q9NRY5 505 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TBC1D13Q9NVG8 400 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 UTP6Q9NYH9 597 aaKnown RBP12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TAB2Q9NYJ8 693 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 HCSTQ9UBK5 93 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 USTQ9Y2C2 406 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 DAAM1Q9Y4D1 1078 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 HCFC2Q9Y5Z7 792 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 WDR81Q562E7 1941 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 HIDE1A8MVS5 230 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 KCNJ18B7U540 433 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 EML1O00423 815 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 INPPL1O15357 1258 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CXCL14O95715 111 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 YWHABP31946 246 aaKnown RBP12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 KRT2P35908 639 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 USP46P62068 366 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 KCNJ12Q14500 433 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SPA17Q15506 151 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CNPY1Q3B7I2 92 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MAEAQ7L5Y9 396 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 EXOC3L1Q86VI1 746 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 IFNLR1Q8IU57 520 aaPredicted RBP12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 VPS52Q8N1B4 723 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 ZNF507Q8TCN5 953 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PIGOQ8TEQ8 1089 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 KCNN1Q92952 543 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 FBXL18Q96ME1 805 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 LXNQ9BS40 222 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 EMILIN2Q9BXX0 1053 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 ANKEF1Q9NU02 776 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 KCNJ14Q9UNX9 436 aa12.03□□□□□ -0.48
TRAF3IP2-208ENST00000392556 STK38LQ9Y2H1 464 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms