RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 B3GNT5Q9BYG0 378 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 ATXN3LQ9H3M9 355 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 APOBEC3GQ9HC16 384 aaKnown RBP12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 OBP2AQ9NY56 170 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 DLGAP2Q9P1A6 1054 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 CA14Q9ULX7 337 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 COQ4Q9Y3A0 265 aa12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 PTPRZ1P23471 2315 aaPredicted RBP12.15□□□□□ -0.46
IGHV4-28-201ENST00000390612 TRIM49BA6NDI0 452 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 HEPACAM2A8MVW5 462 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 A8MXQ7 604 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 SLC16A3O15427 465 aaKnown RBP12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 LRRN2O75325 713 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 EPB41P11171 864 aaKnown RBP12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 PSMC3P17980 439 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 DDX6P26196 483 aaKnown RBP eCLIP12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 PLA2G5P39877 138 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 PPP1R2P41236 205 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 RAP1GAPP47736 663 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 CACNA2D1P54289 1103 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 CYP4F8P98187 520 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 INCA1Q0VD86 236 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 MLF2Q15773 248 aaPredicted RBP12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 SPOPLQ6IQ16 392 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 TTI2Q6NXR4 508 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 MON1AQ86VX9 555 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 ZNF687Q8N1G0 1237 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 STKLD1Q8NE28 680 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 SEMA4DQ92854 862 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 DNASE1L2Q92874 299 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 FAXDC2Q96IV6 333 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 C8orf48Q96LL4 319 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 MFSD1Q9H3U5 465 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 TBC1D17Q9HA65 648 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 CYP3A43Q9HB55 503 aa12.14□□□□□ -0.47
IGHV4-28-201ENST00000390612 PSMA7O14818 248 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 CHADO15335 359 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 PRAMEF12O95522 483 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 P4HA1P13674 534 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 ANP32AP39687 249 aaKnown RBP12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 PIK3CAP42336 1068 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 MLLT6P55198 1093 aaPredicted RBP12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 USP46P62068 366 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 NOP14P78316 857 aaKnown RBP12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 CYP27A1Q02318 531 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 GRM2Q14416 872 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 TAF12Q16514 161 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 ARHGAP15Q53QZ3 475 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 KRT39Q6A163 491 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 ISM2Q6H9L7 571 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 FILIP1Q7Z7B0 1213 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 UNC93AQ86WB7 457 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 SCN4BQ8IWT1 228 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 CMTM8Q8IZV2 173 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 FLCNQ8NFG4 579 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 WHAMMQ8TF30 809 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 IRF7Q92985 503 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 SHDQ96IW2 340 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 CEP63Q96MT8 703 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 TSG101Q99816 390 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 OSBPL6Q9BZF3 934 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 ZNF518BQ9C0D4 1074 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 ELOVL4Q9GZR5 314 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 SLITRK6Q9H5Y7 841 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 IL37Q9NZH6 218 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 KIAA1468Q9P260 1216 aa12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 UXTQ9UBK9 157 aaPredicted RBP12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 MYO18AQ92614 2054 aaKnown RBP12.13□□□□□ -0.47
IGHV4-28-201ENST00000390612 KANSL1LA0AUZ9 987 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 F8VP50 259 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 CLDN5O00501 218 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 TNFRSF10BO14763 440 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 TRIM66O15016 1216 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 PMM2O15305 246 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 STX10O60499 249 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 GLULP15104 373 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 GDI1P31150 447 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 GRIK1P39086 918 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 MXI1P50539 228 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 NDST1P52848 882 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 NHLH1Q02575 133 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 FZD5Q13467 585 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 STIM1Q13586 685 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 ZNF268Q14587 947 aaPredicted RBP12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 TXNDC8Q6A555 127 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 SCARA5Q6ZMJ2 495 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 DENND5BQ6ZUT9 1274 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 FRMD5Q7Z6J6 570 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 GPIHBP1Q8IV16 184 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 CCDC105Q8IYK2 499 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 FUKQ8N0W3 1084 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 MAB21L3Q8N8X9 362 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 TRIML1Q8N9V2 468 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 FBXL13Q8NEE6 735 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 PJA1Q8NG27 643 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 SLC35C1Q96A29 364 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 TNIP3Q96KP6 325 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 GCNAQ96QF7 691 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 TWNKQ96RR1 684 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms