RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 GRASPQ7Z6J2 395 aaPredicted RBP17.19■□□□□ 0.34
SNRPB-201ENST00000381342 FAM35AQ86V20 835 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 C12orf29Q8N999 325 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 FAM200AQ8TCP9 573 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 GPR152Q8TDT2 470 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 NXPE3Q969Y0 559 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 FUBP3Q96I24 572 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNRPB-201ENST00000381342 MED10Q9BTT4 135 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 APEX2Q9UBZ4 518 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 RAPGEFL1Q9UHV5 662 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 AJAP1Q9UKB5 411 aaPredicted RBP17.19■□□□□ 0.34
SNRPB-201ENST00000381342 ZFP37Q9Y6Q3 630 aaPredicted RBP17.19■□□□□ 0.34
SNRPB-201ENST00000381342 MYO16Q9Y6X6 1858 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 MUC3AQ02505 3323 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 CAVIN2O95810 425 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 ACO1P21399 889 aaKnown RBP17.18■□□□□ 0.34
SNRPB-201ENST00000381342 TUFMP49411 452 aaKnown RBP17.18■□□□□ 0.34
SNRPB-201ENST00000381342 CACNA2D1P54289 1103 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 RAD23BP54727 409 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 EPHB3P54753 998 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 KCNMA1Q12791 1236 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 PLD1Q13393 1074 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 DDR2Q16832 855 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 SDHAF4Q5VUM1 108 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 SCN4BQ8IWT1 228 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 CRYBG2Q8N1P7 616 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 ELMOD1Q8N336 334 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 TTC39CQ8N584 583 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 SLC4A11Q8NBS3 891 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 GIPC2Q8TF65 315 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 FAM122AQ96E09 287 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 CORO1BQ9BR76 489 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 LSM14BQ9BX40 385 aaKnown RBP17.18■□□□□ 0.34
SNRPB-201ENST00000381342 UBE2TQ9NPD8 197 aaPredicted RBP17.18■□□□□ 0.34
SNRPB-201ENST00000381342 TMEM30AQ9NV96 361 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 DNMT3BQ9UBC3 853 aaKnown RBP17.18■□□□□ 0.34
SNRPB-201ENST00000381342 PCDHB4Q9Y5E5 795 aa17.18■□□□□ 0.34
SNRPB-201ENST00000381342 ZNF638Q14966 1978 aaKnown RBP17.17■□□□□ 0.34
SNRPB-201ENST00000381342 ADORA2BP29275 332 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 MAGEA11P43364 429 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 KLK7P49862 253 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 PABPC1LQ4VXU2 614 aaKnown RBP17.17■□□□□ 0.34
SNRPB-201ENST00000381342 FKBP15Q5T1M5 1219 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 TMEM270Q6UE05 265 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 PAQR9Q6ZVX9 377 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 HS6ST3Q8IZP7 471 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 FUKQ8N0W3 1084 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 FBXL6Q8N531 539 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 SLC2A14Q8TDB8 520 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 TMEM176AQ96HP8 235 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 KCNH6Q9H252 994 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 MFSD1Q9H3U5 465 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 FAM124BQ9H5Z6 455 aaPredicted RBP17.17■□□□□ 0.34
SNRPB-201ENST00000381342 KCNK12Q9HB15 430 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 KRT82Q9NSB4 513 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 EPS15L1Q9UBC2 864 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 DOCK8Q8NF50 2099 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 ATP8B3O60423 1300 aa17.17■□□□□ 0.34
SNRPB-201ENST00000381342 DENND4CQ5VZ89 1909 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 GOLGA6L19H0YKK7 550 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 RHOP08100 348 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 LAMP2P13473 410 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 PTPN2P17706 415 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 TRIM21P19474 475 aaKnown RBP17.16■□□□□ 0.34
SNRPB-201ENST00000381342 MFAP3P55082 362 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 ZNF445P59923 1031 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 TPM4P67936 248 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 VEPH1Q14D04 833 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 ARHGAP44Q17R89 818 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 SLC5A9Q2M3M2 681 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 IQCEQ6IPM2 695 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 DPY19L2P1Q6NXN4 242 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 VSTM1Q6UX27 236 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 RBBP8NLQ8NC74 664 aaPredicted RBP17.16■□□□□ 0.34
SNRPB-201ENST00000381342 PSMG2Q969U7 264 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 ZNF512Q96ME7 567 aaPredicted RBP17.16■□□□□ 0.34
SNRPB-201ENST00000381342 HEXIM2Q96MH2 286 aaKnown RBP17.16■□□□□ 0.34
SNRPB-201ENST00000381342 MYADMQ96S97 322 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 PRRX2Q99811 253 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 ZNF334Q9HCZ1 680 aaPredicted RBP17.16■□□□□ 0.34
SNRPB-201ENST00000381342 FBXL21Q9UKT6 434 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 FHOD1Q9Y613 1164 aa17.16■□□□□ 0.34
SNRPB-201ENST00000381342 LRRC10BA6NIK2 292 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 F8VP50 259 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 NRG2O14511 850 aaPredicted RBP17.15■□□□□ 0.34
SNRPB-201ENST00000381342 AP1G2O75843 785 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 CALCAP01258 141 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 KRT5P13647 590 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 GRIK1P39086 918 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 RPL10AP62906 217 aaKnown RBP17.15■□□□□ 0.34
SNRPB-201ENST00000381342 UBXN1Q04323 297 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 SYCP1Q15431 976 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 PPP1R26Q5T8A7 1209 aaPredicted RBP17.15■□□□□ 0.34
SNRPB-201ENST00000381342 ENOSF1Q7L5Y1 443 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 TMC8Q8IU68 726 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 RNF214Q8ND24 703 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 CYFIP2Q96F07 1278 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 SMARCD1Q96GM5 515 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 DNAI2Q9GZS0 605 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms