RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 RHOT1Q8IXI2 618 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 RPAP3Q9H6T3 665 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 RGPD5Q99666 1765 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 BBIP1A8MTZ0 92 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PSEN1P49768 467 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CACNA2D1P54289 1103 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 VEPH1Q14D04 833 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 G2E3Q7L622 706 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ERO1BQ86YB8 467 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 FAM178BQ8IXR5 827 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 GSPT2Q8IYD1 628 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 THEM5Q8N1Q8 247 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 NT5C1BQ96P26 610 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TRABDQ9H4I3 376 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ZFYVE1Q9HBF4 777 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 AKAP7Q9P0M2 348 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 RAD54BQ9Y620 910 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 KIAA1551Q9HCM1 1747 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 BNIP3LO60238 219 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 VPS41P49754 854 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 GFPT1Q06210 699 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TP53BP2Q13625 1128 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PKP1Q13835 747 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 KRT33BQ14525 404 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 AHI1Q8N157 1196 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 RDH13Q8NBN7 331 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 AGR3Q8TD06 166 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 RAB2BQ8WUD1 216 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 SLCO2A1Q92959 643 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 FAXDC2Q96IV6 333 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 DESI2Q9BSY9 194 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CLEC4MQ9H2X3 399 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 GREM2Q9H772 168 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 KRT82Q9NSB4 513 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 MOSPD1Q9UJG1 213 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PNMA6EA0A0J9YXQ4 647 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 FAM25EA8MYX2 175 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 NBPF26B4DH59 902 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 DLATP10515 647 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 MAPTP10636 758 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CHN1P15882 459 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PROZP22891 400 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CIITAP33076 1130 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 NNMTP40261 264 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 STAT5AP42229 794 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CD151P48509 253 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 STAT5BP51692 787 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TTC39BQ5VTQ0 682 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 KLHL7Q8IXQ5 586 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PGBD3Q8N328 593 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 C12orf50Q8NA57 414 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PPP1R16BQ96T49 567 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TOPORSQ9NS56 1045 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 MRPL39Q9NYK5 338 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 IRS2Q9Y4H2 1338 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 RGPD2P0DJD1 1756 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ERI2A8K979 691 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 H7C1W4 665 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TRAFD1O14545 582 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 LRRN2O75325 713 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 HSPD1P10809 573 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 KCNA2P16389 499 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PHKA2P46019 1235 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 DPYDQ12882 1025 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CCDC157Q569K6 752 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 EFHC1Q5JVL4 640 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ARMCX2Q7L311 632 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 SFR1Q86XK3 245 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ASAP3Q8TDY4 903 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 COX4I2Q96KJ9 171 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ZNF577Q9BSK1 485 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 C17orf75Q9HAS0 396 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TAS2R1Q9NYW7 299 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 FARP1Q9Y4F1 1045 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PIGBOS1A0A0B4J2F0 54 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CENPBD1B2RD01 187 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 RTN2O75298 545 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TRIM3O75382 744 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ALDH1A1P00352 501 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PIK3CAP42336 1068 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 GEMIN4P57678 1058 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PTPN12Q05209 780 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ACAP1Q15027 740 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 HIF1AQ16665 826 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 METTL21CQ5VZV1 264 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ALKBH5Q6P6C2 394 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TRIM65Q6PJ69 517 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TTC29Q8NA56 475 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 FAM149B1Q96BN6 582 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PRPF18Q99633 342 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 DLGAP2Q9P1A6 1054 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TRMT6Q9UJA5 497 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 STXBP5LQ9Y2K9 1186 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 NAV1Q8NEY1 1877 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ADAMTSL3P82987 1691 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 SFI1A8K8P3 1242 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 ASS1P00966 412 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 PABPC1P11940 636 aaKnown RBP5.06□□□□□ -1.6
PTPRD-203ENST00000381196 JAK3P52333 1124 aa5.06□□□□□ -1.6
PTPRD-203ENST00000381196 LRRC38Q5VT99 294 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms