RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PPHLN1Q8NEY8 458 aaKnown RBP18.13■□□□□ 0.49
PTPRU-202ENST00000373779 TCP10LQ8TDR4 215 aa18.13■□□□□ 0.49
PTPRU-202ENST00000373779 PBXIP1Q96AQ6 731 aa18.13■□□□□ 0.49
PTPRU-202ENST00000373779 MRPL1Q9BYD6 325 aaKnown RBP18.13■□□□□ 0.49
PTPRU-202ENST00000373779 DNPEPQ9ULA0 475 aa18.13■□□□□ 0.49
PTPRU-202ENST00000373779 SCAF8Q9UPN6 1271 aaKnown RBP18.13■□□□□ 0.49
PTPRU-202ENST00000373779 DFFAO00273 331 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 EEF2KO00418 725 aaKnown RBP18.12■□□□□ 0.49
PTPRU-202ENST00000373779 PSMD10O75832 226 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 RXRBP28702 533 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 NLRP11P59045 1033 aaKnown RBP18.12■□□□□ 0.49
PTPRU-202ENST00000373779 QPCTQ16769 361 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 ARSHQ5FYA8 562 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 SWT1Q5T5J6 900 aaKnown RBP18.12■□□□□ 0.49
PTPRU-202ENST00000373779 ING2Q9H160 280 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 CDYLQ9Y232 598 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 EPHB2P29323 1055 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 UGP2Q16851 508 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 WDR49Q8IV35 697 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 ETNPPLQ8TBG4 499 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 SPIRE2Q8WWL2 714 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 MKL1Q969V6 931 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 CAMTA1Q9Y6Y1 1673 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 C3orf70A6NLC5 250 aaPredicted RBP18.12■□□□□ 0.49
PTPRU-202ENST00000373779 OPLAHO14841 1288 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 SPATA31C1P0DKV0 1188 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 MFSD7Q6UXD7 560 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 NIPA1Q7RTP0 329 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 KATNAL2Q8IYT4 538 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 PDCD2LQ9BRP1 358 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 SIK2Q9H0K1 926 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 LRRC19Q9H756 370 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 IFT43Q96FT9 208 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 C20orf96Q9NUD7 363 aaPredicted RBP18.12■□□□□ 0.49
PTPRU-202ENST00000373779 USP18Q9UMW8 372 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 TMEM150BA6NC51 233 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 MYL6P60660 151 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 PDK2Q15119 407 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 MAP4K3Q8IVH8 894 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 ZC3H15Q8WU90 426 aaKnown RBP18.12■□□□□ 0.49
PTPRU-202ENST00000373779 EME1Q96AY2 570 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 BTBD10Q9BSF8 475 aa18.12■□□□□ 0.49
PTPRU-202ENST00000373779 ASB14A6NK59 587 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 FDFT1P37268 417 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 PRAMEP78395 509 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 NSUN2Q08J23 767 aaKnown RBP eCLIP18.11■□□□□ 0.49
PTPRU-202ENST00000373779 PGM5Q15124 567 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 EFCAB12Q6NXP0 572 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 CRELD2Q6UXH1 353 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-202ENST00000373779 SETD3Q86TU7 594 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-202ENST00000373779 ZFPM1Q8IX07 1006 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 MICALL2Q8IY33 904 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 APPL2Q8NEU8 664 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 AGAP11Q8TF27 550 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 TFB1MQ8WVM0 346 aaKnown RBP18.11■□□□□ 0.49
PTPRU-202ENST00000373779 ZNF606Q8WXB4 792 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 ZNF75CPQ92670 426 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-202ENST00000373779 ZBTB18Q99592 522 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 SHCBP1LQ9BZQ2 653 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 KRT16P08779 473 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 PDGFRBP09619 1106 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 CDR2LQ86X02 465 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-202ENST00000373779 FAM71AQ8IYT1 594 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 ACP6Q9NPH0 428 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 KRT82Q9NSB4 513 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 hCG_2014768A0A024R1R8 64 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 SPDYE2BA6NHP3 402 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 ANKRD63C9JTQ0 380 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 E7ENQ6 273 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 SPDYE6P0CI01 402 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 TCF7P36402 384 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-202ENST00000373779 MMP13P45452 471 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 THEM5Q8N1Q8 247 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 OR6P1Q8NGX9 317 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 OTUD5Q96G74 571 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 ATF5Q9Y2D1 282 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-202ENST00000373779 SNX2O60749 519 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 MAP3K6O95382 1288 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 CBX6O95503 412 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 IL10P22301 178 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 SSTR1P30872 391 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 KCTD19Q17RG1 926 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-202ENST00000373779 SLC9A9Q8IVB4 645 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 EMC1Q8N766 993 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 STK32AQ8WU08 396 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 ZNF669Q96BR6 464 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-202ENST00000373779 ARHGAP26Q9UNA1 814 aa18.11■□□□□ 0.49
PTPRU-202ENST00000373779 PSMD3O43242 534 aa18.1■□□□□ 0.49
PTPRU-202ENST00000373779 MYL3P08590 195 aa18.1■□□□□ 0.49
PTPRU-202ENST00000373779 ACADSBP45954 432 aa18.1■□□□□ 0.49
PTPRU-202ENST00000373779 CHST13Q8NET6 341 aa18.1■□□□□ 0.49
PTPRU-202ENST00000373779 IDI2Q9BXS1 227 aa18.1■□□□□ 0.49
PTPRU-202ENST00000373779 CCDC134Q9H6E4 229 aa18.1■□□□□ 0.49
PTPRU-202ENST00000373779 DCDC2Q9UHG0 476 aa18.1■□□□□ 0.49
PTPRU-202ENST00000373779 STARD13Q9Y3M8 1113 aa18.1■□□□□ 0.49
PTPRU-202ENST00000373779 CCDC78A2IDD5 438 aa18.1■□□□□ 0.49
PTPRU-202ENST00000373779 TGFB1I1O43294 461 aa18.1■□□□□ 0.49
PTPRU-202ENST00000373779 SKAP2O75563 359 aaPredicted RBP18.1■□□□□ 0.49
PTPRU-202ENST00000373779 TMEM259Q4ZIN3 620 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms