RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MEI1Q5TIA1 1274 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 PSRC1Q6PGN9 363 aaPredicted RBP19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 TAS1R1Q7RTX1 841 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 C18orf8Q96DM3 657 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 BTBD6Q96KE9 485 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 VN1R3Q9BXE9 311 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 TLR10Q9BXR5 811 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 SLC4A5Q9BY07 1137 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 SNX12Q9UMY4 172 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 NCK2O43639 380 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 BEST1O76090 585 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 GJB5O95377 273 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 KCNT2Q6UVM3 1135 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 FAM35AQ86V20 835 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 CEP57Q86XR8 500 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 XYLT1Q86Y38 959 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 STK32AQ8WU08 396 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 HERVK_113Q902F9 699 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 MYLPFQ96A32 169 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 IGSF21Q96ID5 467 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 YME1L1Q96TA2 773 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 DUSP16Q9BY84 665 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 ABCB6Q9NP58 842 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 TMEM30AQ9NV96 361 aa19.16■□□□□ 0.66
SMARCD3-202ENST00000356800 E5RJQ4 531 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 PIK3R2O00459 728 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 CTIFO43310 598 aaKnown RBP19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 RPL34P49207 117 aaKnown RBP19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 GSCP56915 257 aaPredicted RBP19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 HTRA4P83105 476 aaPredicted RBP19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 ELAVL2Q12926 359 aaKnown RBP19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 WHAMMP3Q1A5X7 153 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 PPP1R15BQ5SWA1 713 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 DAAM2Q86T65 1068 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 RNF168Q8IYW5 571 aaPredicted RBP19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 C3orf20Q8ND61 904 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 MED10Q9BTT4 135 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 RHOBTB2Q9BYZ6 727 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 ST7Q9NRC1 585 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 PARVAQ9NVD7 372 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 STRIP2Q9ULQ0 834 aa19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 LAMA2P24043 3122 aaKnown RBP19.15■□□□□ 0.66
SMARCD3-202ENST00000356800 OR4Q2P0C623 313 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 NPR3P17342 541 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 TCP1P17987 556 aaKnown RBP19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 CACNA2D1P54289 1103 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 TSPY1Q01534 308 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 PTPROQ16827 1216 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 RTP2Q5QGT7 225 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 SPOUT1Q5T280 376 aaKnown RBP19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 CLEC20AQ6ZU45 233 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 TMEM110Q86TL2 294 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 SLC39A11Q8N1S5 342 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 COLGALT1Q8NBJ5 622 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 MSANTD4Q8NCY6 345 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 UBE2Q2Q8WVN8 375 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 ZNF558Q96NG5 402 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 SMOQ99835 787 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 ZCWPW1Q9H0M4 648 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 SYNCQ9H7C4 482 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 KRT82Q9NSB4 513 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 ANAPC7Q9UJX3 599 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 HYOU1Q9Y4L1 999 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 SCINQ9Y6U3 715 aa19.14■□□□□ 0.66
SMARCD3-202ENST00000356800 XPO1O14980 1071 aaKnown RBP19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 PLA2G4AP47712 749 aa19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 RPL7AP62424 266 aaKnown RBP19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 ZNF268Q14587 947 aaPredicted RBP19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 MESDQ14696 234 aa19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 C11orf63Q6NUN7 778 aa19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 DNAJC24Q6P3W2 148 aa19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 NT5DC3Q86UY8 548 aa19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 CPNE8Q86YQ8 564 aa19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 DPF3Q92784 378 aa19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 MCRS1Q96EZ8 462 aa19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 MRPL47Q9HD33 250 aaKnown RBP19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 PACSIN2Q9UNF0 486 aaPredicted RBP19.14■□□□□ 0.65
SMARCD3-202ENST00000356800 PATJQ8NI35 1801 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 UQCRHLA0A096LP55 91 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 TMEM191CA6NGB0 347 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 TMEM110-MUSTN1A8MSY1 372 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 GOLGA8SH3BPF8 625 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 TBC1D4O60343 1298 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 AP1G2O75843 785 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 UQCRHP07919 91 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 LINC00271P0C7V0 271 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 FAM200BP0CF97 657 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 LAG3P18627 525 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 RABGGTBP53611 331 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 CTXN3Q4LDR2 81 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 FAM183BPQ6ZVS7 135 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 PIGZQ86VD9 579 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 ZMIZ2Q8NF64 920 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 FEZF2Q8TBJ5 459 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 IPO4Q8TEX9 1081 aaKnown RBP19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 PIWIL1Q96J94 861 aaKnown RBP19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 OSBPL9Q96SU4 736 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 TTPALQ9BTX7 342 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 CARD6Q9BX69 1037 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 WDR35Q9P2L0 1181 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms