RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ANKRD52Q8NB46 1076 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 ATAD1Q8NBU5 361 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 SMOQ99835 787 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 PACSIN1Q9BY11 444 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 DNAI2Q9GZS0 605 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 LHX5Q9H2C1 402 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 TJP2Q9UDY2 1190 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 ADGRG1Q9Y653 693 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 MTMR11A4FU01 709 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 RFXAPO00287 272 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 TEX28O15482 410 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 GABBR2O75899 941 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 CNPP09543 421 aaKnown RBP20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 CYP2F1P24903 491 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 CA8P35219 290 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 UBE3AQ05086 875 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 C2CD6Q53TS8 623 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 ACAD10Q6JQN1 1059 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 TRIM72Q6ZMU5 477 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 GPR65Q8IYL9 337 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 ZMIZ2Q8NF64 920 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 GDPD5Q8WTR4 605 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 DUSP16Q9BY84 665 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 OXCT2Q9BYC2 517 aaPredicted RBP20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 SLC28A3Q9HAS3 691 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 ENTPD7Q9NQZ7 604 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 TLR9Q9NR96 1032 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 KRT82Q9NSB4 513 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 ABI2Q9NYB9 513 aaPredicted RBP20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 STK39Q9UEW8 545 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 PATJQ8NI35 1801 aa20.11■□□□□ 0.81
CHMP4A-201ENST00000347519 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 RCCD1A6NED2 376 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 NRDCO43847 1150 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 AP1G2O75843 785 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 CENPCQ03188 943 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 MAPRE1Q15691 268 aaKnown RBP20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 HS1BP3Q53T59 392 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 CLEC20AQ6ZU45 233 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 SPATA2LQ8IUW3 424 aaPredicted RBP20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 TMEM35BQ8NCS4 154 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 SLC35F5Q8WV83 523 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 KLHL5Q96PQ7 755 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 KCNK16Q96T55 309 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 ISCUQ9H1K1 167 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 FNIP2Q9P278 1114 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 HESX1Q9UBX0 185 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 PCDHA13Q9Y5I0 950 aa20.1■□□□□ 0.81
CHMP4A-201ENST00000347519 C2orf71A6NGG8 1288 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 RTN2O75298 545 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 LSM8O95777 96 aaKnown RBP20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 FTLP02792 175 aaPredicted RBP20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 FAM200BP0CF97 657 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 GZMAP12544 262 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 NPR3P17342 541 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 MAGEA1P43355 309 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 GPR15P49685 360 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 RGS7P49802 495 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 BCAT1P54687 386 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 MAP3K7CLP57077 242 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 BST2Q10589 180 aaKnown RBP20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 PTP4A2Q12974 167 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 RAB33AQ14088 237 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 NFE2Q16621 373 aaPredicted RBP20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 PTPN20Q4JDL3 420 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 PMF1Q6P1K2 205 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 LLGL2Q6P1M3 1020 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 C4orf50Q6ZRC1 276 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 MRPL43Q8N983 215 aaKnown RBP20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 TRIM44Q96DX7 344 aaPredicted RBP20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 SLC27A5Q9Y2P5 690 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 PCDHB5Q9Y5E4 795 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 MYO7AQ13402 2215 aa20.09■□□□□ 0.81
CHMP4A-201ENST00000347519 PIK3R2O00459 728 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 SOAT2O75908 522 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 ABLIM3O94929 683 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 SEC24AO95486 1093 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 GALCP54803 685 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 PDCLQ13371 301 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 SMC1AQ14683 1233 aaKnown RBP20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 PHLDB2Q86SQ0 1253 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 C17orf53Q8N3J3 647 aaPredicted RBP20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 SMARCD1Q96GM5 515 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 CPXM1Q96SM3 734 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 CSNK1G1Q9HCP0 422 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 IRAK3Q9Y616 596 aa20.08■□□□□ 0.81
CHMP4A-201ENST00000347519 HHLA1C9JL84 531 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 ABL1P00519 1130 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 NDUFV1P49821 464 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 ADCY1Q08828 1119 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 DUSP4Q13115 394 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 SPA17Q15506 151 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 LRIT3Q3SXY7 679 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 CFAP221Q4G0U5 840 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 SDHAF4Q5VUM1 108 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 MMS22LQ6ZRQ5 1243 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 MON1BQ7L1V2 547 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 GPRIN1Q7Z2K8 1008 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 PIGZQ86VD9 579 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms