RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 MIEF2Q96C03 454 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 HOXC10Q9NYD6 342 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 DAPK2Q9UIK4 370 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 MEI4A8MW99 385 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 TEX33O43247 280 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 BNIP3LO60238 219 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 CLEC16AQ2KHT3 1053 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 CCDC153Q494R4 210 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 FAM98BQ52LJ0 330 aaKnown RBP20.07■□□□□ 0.8
HDAC4-201ENST00000345617 NLGN1Q8N2Q7 840 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 RPAP3Q9H6T3 665 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-201ENST00000345617 TTC27Q6P3X3 843 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 THNSL1Q8IYQ7 743 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 FBXO28Q9NVF7 368 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 GALCP54803 685 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 ZNF394Q53GI3 561 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 EID3Q8N140 333 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 VTI1BQ9UEU0 232 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 SLC24A2Q9UI40 661 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 IPPQ9Y573 584 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 LMTK3Q96Q04 1460 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 NPM3O75607 178 aaKnown RBP20.06■□□□□ 0.8
HDAC4-201ENST00000345617 TGM2P21980 687 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 FASP25445 335 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 RIPPLY1Q0D2K3 151 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 EIF2AK1Q9BQI3 630 aaKnown RBP20.06■□□□□ 0.8
HDAC4-201ENST00000345617 THUMPD3Q9BV44 507 aaKnown RBP20.06■□□□□ 0.8
HDAC4-201ENST00000345617 CD3EAPO15446 510 aaKnown RBP20.06■□□□□ 0.8
HDAC4-201ENST00000345617 BMP10O95393 424 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 CACNA2D1P54289 1103 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 VEPH1Q14D04 833 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 SCN4BQ8IWT1 228 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 SETBP1Q9Y6X0 1596 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 TMEM253P0C7T8 217 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 SLC2A3P11169 496 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 MRPL39Q9NYK5 338 aaKnown RBP20.06■□□□□ 0.8
HDAC4-201ENST00000345617 LRRC7Q96NW7 1537 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 VWA5AO00534 786 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 ACTRT1Q8TDG2 376 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 S100ZQ8WXG8 99 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 RNFT2Q96EX2 444 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 TIMMDC1Q9NPL8 285 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 NEDD4P46934 1319 aa20.06■□□□□ 0.8
HDAC4-201ENST00000345617 GUCA1AP43080 201 aaPredicted RBP20.05■□□□□ 0.8
HDAC4-201ENST00000345617 SPACA6W5XKT8 324 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 RARGP13631 454 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 IARS2Q9NSE4 1012 aaKnown RBP20.05■□□□□ 0.8
HDAC4-201ENST00000345617 SLC16A4O15374 487 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 DNAJC3Q13217 504 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 CAMKK2Q96RR4 588 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 SRPK1Q96SB4 655 aaKnown RBP20.05■□□□□ 0.8
HDAC4-201ENST00000345617 IGSF9BQ9UPX0 1349 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 SYNCRIPO60506 623 aaKnown RBP20.05■□□□□ 0.8
HDAC4-201ENST00000345617 ZCCHC18P0CG32 403 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 SULT1E1P49888 294 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 ADARP55265 1226 aaKnown RBP20.05■□□□□ 0.8
HDAC4-201ENST00000345617 RBM46Q8TBY0 533 aaKnown RBP20.05■□□□□ 0.8
HDAC4-201ENST00000345617 ATP9BO43861 1147 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 OTUD4Q01804 1114 aaKnown RBP20.05■□□□□ 0.8
HDAC4-201ENST00000345617 MZT2BQ6NZ67 158 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 YTHDF3Q7Z739 585 aaKnown RBP20.05■□□□□ 0.8
HDAC4-201ENST00000345617 SLC38A7Q9NVC3 462 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 NDUFAF6Q330K2 333 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 MYL12AP19105 171 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 YWHABP31946 246 aaKnown RBP20.05■□□□□ 0.8
HDAC4-201ENST00000345617 ERGIC2Q96RQ1 377 aa20.05■□□□□ 0.8
HDAC4-201ENST00000345617 H2AFXP16104 143 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-201ENST00000345617 HNMTP50135 292 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 SLC34A1Q06495 639 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 MTA1Q13330 715 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 PRKG1Q13976 671 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 PHKG1Q16816 387 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 MYLK2Q9H1R3 596 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 TMEM8AQ9HCN3 771 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 SAR1AQ9NR31 198 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 LIN7AO14910 233 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-201ENST00000345617 EIF2AK2P19525 551 aaKnown RBP20.04■□□□□ 0.8
HDAC4-201ENST00000345617 XRCC4Q13426 336 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 CRELD2Q6UXH1 353 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-201ENST00000345617 CCDC36Q8IYA8 594 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 STKLD1Q8NE28 680 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 AP3S1Q92572 193 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 LARGE1O95461 756 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 AKT1P31749 480 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 CRKLP46109 303 aaKnown RBP20.04■□□□□ 0.8
HDAC4-201ENST00000345617 ZNF341Q9BYN7 854 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 EEF2KO00418 725 aaKnown RBP20.04■□□□□ 0.8
HDAC4-201ENST00000345617 HSMCR30P0CW71 290 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 SNRNP35Q16560 246 aaKnown RBP20.04■□□□□ 0.8
HDAC4-201ENST00000345617 FAM180AQ6UWF9 173 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 MYL4P12829 197 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 PPP2R1BP30154 601 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 MCAMP43121 646 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 MAD2L1Q13257 205 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-201ENST00000345617 HEY2Q9UBP5 337 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 NEO1Q92859 1461 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 FAM220BPB1ANY3 271 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 SERPINB5P36952 375 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 ARPP19P56211 112 aa20.04■□□□□ 0.8
HDAC4-201ENST00000345617 TMPRSS6Q8IU80 811 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms