RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 PROM2Q8N271 834 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 C10orf53Q8N6V4 93 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 CLP1Q92989 425 aaKnown RBP6.82□□□□□ -1.32
PCDH18-201ENST00000344876 PLEKHF1Q96S99 279 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 DCUN1D5Q9BTE7 237 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 THUMPD3Q9BV44 507 aaKnown RBP6.82□□□□□ -1.32
PCDH18-201ENST00000344876 ARHGEF3Q9NR81 526 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 HEY2Q9UBP5 337 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 F8W8V4 182 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 PHF2O75151 1096 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 USP1O94782 785 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 CLTBP09497 229 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 C6orf222P0C671 652 aaPredicted RBP6.82□□□□□ -1.32
PCDH18-201ENST00000344876 IRF1P10914 325 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 MAGEA4P43358 317 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 RHAGQ02094 409 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 DSG1Q02413 1049 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 PTGISQ16647 500 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 DDI2Q5TDH0 399 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 SNRNP48Q6IEG0 339 aaKnown RBP6.82□□□□□ -1.32
PCDH18-201ENST00000344876 TBC1D19Q8N5T2 526 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 BEST2Q8NFU1 509 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 EIF2AK1Q9BQI3 630 aaKnown RBP6.82□□□□□ -1.32
PCDH18-201ENST00000344876 LY9Q9HBG7 655 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 ZNF302Q9NR11 478 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 LEMD3Q9Y2U8 911 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 ARHGEF10O15013 1369 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 CASC3O15234 703 aaKnown RBP6.82□□□□□ -1.32
PCDH18-201ENST00000344876 CDH16O75309 829 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 TOMM70O94826 608 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 PDGFRAP16234 1089 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 ZNF3P17036 446 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 PRKACBP22694 351 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 SLC9A3P48764 834 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 SARSP49591 514 aaKnown RBP6.82□□□□□ -1.32
PCDH18-201ENST00000344876 TMEM62Q0P6H9 643 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 DDX39BQ13838 428 aaKnown RBP6.82□□□□□ -1.32
PCDH18-201ENST00000344876 SMYD5Q6GMV2 418 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 GPR141Q7Z602 305 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 JAMLQ86YT9 394 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 IPMKQ8NFU5 416 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 PI4K2AQ9BTU6 479 aa6.82□□□□□ -1.32
PCDH18-201ENST00000344876 AGO2Q9UKV8 859 aaKnown RBP6.82□□□□□ -1.32
PCDH18-201ENST00000344876 SYCP2Q9BX26 1530 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 ZC3H11AO75152 810 aaKnown RBP eCLIP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 IFNA16P05015 189 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 GRIK1P39086 918 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 GLRBP48167 497 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 NUP107P57740 925 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 ABCE1P61221 599 aaKnown RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 SMU1Q2TAY7 513 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 FASTKD5Q7L8L6 764 aaKnown RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 OTOAQ7RTW8 1153 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 DDX53Q86TM3 631 aaKnown RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 DNAAF5Q86Y56 855 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 FAM71DQ8N9W8 422 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 JADE3Q92613 823 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 E2F7Q96AV8 911 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 ZFP42Q96MM3 310 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 PNKPQ96T60 521 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 BLOC1S6Q9UL45 172 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 FHOD1Q9Y613 1164 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 PIPSLA2A3N6 862 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 DPYSL4O14531 572 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 RTN2O75298 545 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 ENO2P09104 434 aaPredicted RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 COMTP21964 271 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 NNMTP40261 264 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 ETV5P41161 510 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 SCNN1BP51168 640 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 ALCAMQ13740 583 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 GALNTL6Q49A17 601 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 SYTL3Q4VX76 610 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 CYP4A22Q5TCH4 519 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 SUSD4Q5VX71 490 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 UBA3Q8TBC4 463 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 USP13Q92995 863 aaPredicted RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 DCUN1D1Q96GG9 259 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 DNAAF2Q9NVR5 837 aaKnown RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 SELENONQ9NZV5 590 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 SMG5Q9UPR3 1016 aaKnown RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 ARHGEF37A1IGU5 675 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 C3orf70A6NLC5 250 aaPredicted RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 C2orf81A6NN90 581 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 SPTLC1O15269 473 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 STX7O15400 261 aaKnown RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 NDUFS3O75489 264 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 PLEKP08567 350 aaPredicted RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 CDH2P19022 906 aaPredicted RBP6.81□□□□□ -1.32
PCDH18-201ENST00000344876 CDC16Q13042 620 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 PRR23BQ6ZRT6 265 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 REXO1L1PQ8IX06 675 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 ADGRF4Q8IZF3 695 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 UCMAQ8WVF2 138 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 ANKRD49Q8WVL7 239 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 TMEM143Q96AN5 459 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 CMTM5Q96DZ9 223 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 PDLIM2Q96JY6 352 aa6.81□□□□□ -1.32
PCDH18-201ENST00000344876 ECSITQ9BQ95 431 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms