RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 TMEM221A6NGB7 291 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 UBE3AQ05086 875 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 RAD51Q06609 339 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 HIF1AQ16665 826 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 SPOPLQ6IQ16 392 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 FBXO25Q8TCJ0 367 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 VPS33AQ96AX1 596 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 BIRC8Q96P09 236 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 ERGIC2Q96RQ1 377 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 CDC42EP4Q9H3Q1 356 aaKnown RBP13.11□□□□□ -0.31
BRPF3-201ENST00000339717 POLR3BQ9NW08 1133 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-201ENST00000339717 KCNK4Q9NYG8 393 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 DNM3Q9UQ16 869 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 FUOMA2VDF0 154 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 VBP1P61758 197 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 TTBK2Q6IQ55 1244 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 ZCCHC8Q6NZY4 707 aaKnown RBP13.11□□□□□ -0.31
BRPF3-201ENST00000339717 POTEHQ6S545 545 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 ABRAXAS1Q6UWZ7 409 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 SAMD14Q8IZD0 417 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-201ENST00000339717 DHRSXQ8N5I4 330 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 METTL13Q8N6R0 699 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 PPM1NQ8N819 430 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 E9PBE3 544 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 ZBTB5O15062 677 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 GCNT3O95395 438 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 MYCP01106 439 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-201ENST00000339717 CHRNB1P11230 501 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 IFNAR1P17181 557 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 SLC16A2P36021 539 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 MAPK12P53778 367 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 RASSF6Q6ZTQ3 369 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 MMAAQ8IVH4 418 aaKnown RBP13.11□□□□□ -0.31
BRPF3-201ENST00000339717 BBS5Q8N3I7 341 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 HTRA1Q92743 480 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 BABAM1Q9NWV8 329 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 IGSF9Q9P2J2 1179 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 PMF1-BGLAPU3KQ54 211 aa13.11□□□□□ -0.31
BRPF3-201ENST00000339717 PSMD12O00232 456 aaPredicted RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 PIK3R2O00459 728 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 FOXN1O15353 648 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 UGT1A9O60656 530 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 TFRCP02786 760 aaKnown RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 DBTP11182 482 aaKnown RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 UGT1A6P19224 532 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 UGT1A1P22309 533 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 UGT1A4P22310 534 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 UGT1A3P35503 534 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 UGT1A5P35504 534 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 HNRNPFP52597 415 aaKnown RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 CDC16Q13042 620 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 QPRTQ15274 297 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 TTC7BQ86TV6 843 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 ULK2Q8IYT8 1036 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 POU5F2Q8N7G0 328 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 FANCBQ8NB91 859 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 PIK3C3Q8NEB9 887 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 NUDT12Q9BQG2 462 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 SLC13A1Q9BZW2 595 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 UGT1A7Q9HAW7 530 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 UGT1A10Q9HAW8 530 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 UGT1A8Q9HAW9 530 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 GDAP2Q9NXN4 497 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 CACNA2D2Q9NY47 1150 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 GCNT4Q9P109 453 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 ADAM30Q9UKF2 790 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 CCNB1P14635 433 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 MZT2BQ6NZ67 158 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 XKRXQ6PP77 449 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 WDR36Q8NI36 951 aaKnown RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 POMGNT1Q8WZA1 660 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 SLC7A5P2Q9GIP4 190 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 UBA2Q9UBT2 640 aaPredicted RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 FLT1P17948 1338 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 KIAA0408Q6ZU52 694 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 IFNL2Q8IZJ0 200 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 MIGA1Q8NAN2 632 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 SLC22A8Q8TCC7 542 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 AFG1LQ8WV93 481 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 MTG1Q9BT17 334 aaPredicted RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 SERHL2Q9H4I8 314 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 SNAP23O00161 211 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 OR7A10O76100 309 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 SERPINB9P50453 376 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 LRP8Q14114 963 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 PDZK1Q5T2W1 519 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 STYK1Q6J9G0 422 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 PHC2Q8IXK0 858 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 ZNF654Q8IZM8 581 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 KYQ8NBH2 561 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 OR8H1Q8NGG4 311 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 NARS2Q96I59 477 aaKnown RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 TBATAQ96M53 351 aa13.1□□□□□ -0.31
BRPF3-201ENST00000339717 INTS2Q9H0H0 1204 aaKnown RBP13.1□□□□□ -0.31
BRPF3-201ENST00000339717 SEMA4AQ9H3S1 761 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms