RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TMEM191CA6NGB0 347 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 MAFGO15525 162 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 KRT3P12035 628 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 MMP8P22894 467 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 HADHQ16836 314 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 ZNF568Q3ZCX4 644 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 NBPF12Q5TAG4 269 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 CIAPIN1Q6FI81 312 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 CCNJLQ8IV13 435 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 PDIK1LQ8N165 341 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 NUDCD1Q96RS6 583 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 WRNIP1Q96S55 665 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 MAP3K20Q9NYL2 800 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 CHMP2BQ9UQN3 213 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 CHKBQ9Y259 395 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 TCEA3O75764 348 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 PSMC1P62191 440 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 MORF4L2Q15014 288 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 TAF1BQ53T94 588 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 MTDHQ86UE4 582 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 GMLQ99445 158 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 DDX50Q9BQ39 737 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 FOXP3Q9BZS1 431 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 SMAPO00193 183 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 MT-ND3P03897 115 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 EPHB2P29323 1055 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 SERPINB4P48594 390 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 PTP4A2Q12974 167 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 FAM71DQ8N9W8 422 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 TMEM174Q8WUU8 243 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 CGRRF1Q99675 332 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 HAPLN2Q9GZV7 340 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 PRKAG3Q9UGI9 489 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 ACTL7BQ9Y614 415 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 SUPT20HL2P0C7V6 817 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 RFC1P35251 1148 aaPredicted RBP17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 NRLP54845 237 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 GEMIN4P57678 1058 aaKnown RBP17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 OGDHQ02218 1023 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 ZNF699Q32M78 642 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 SUPT20HL1Q3ZLR7 823 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 C15orf39Q6ZRI6 1047 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 FBXO36Q8NEA4 188 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 ZNF75CPQ92670 426 aaPredicted RBP17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 NDNQ99608 321 aa17.3■□□□□ 0.36
CDC42EP4-201ENST00000335793 PEX10O60683 326 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 ERFP50548 548 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 PIGHQ14442 188 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 FKBP1CQ5VVH2 108 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 NLRP9Q7RTR0 991 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 CCDC125Q86Z20 511 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 ATP11CQ8NB49 1132 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 SENP1Q9P0U3 644 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 STARD13Q9Y3M8 1113 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 ANKRD31Q8N7Z5 1873 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 LTBP1Q14766 1721 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 MAP3K6O95382 1288 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 POLR2BP30876 1174 aaKnown RBP17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 CDO1Q16878 200 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 TCP10LQ8TDR4 215 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 PAFAH2Q99487 392 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 LRRC37AA6NMS7 1700 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 hCG_1818297A0A087WSY0 165 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 INO80B-WBP1J3KQ70 363 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 PLSCR1O15162 318 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 RGS20O76081 388 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 STXBP2Q15833 593 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 DUOXA2Q1HG44 320 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 ANKRD22Q5VYY1 191 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 SCYL2Q6P3W7 929 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 ABHD15Q6UXT9 468 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 SCYL3Q8IZE3 742 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 VPS52Q8N1B4 723 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 LRRC71Q8N4P6 559 aa17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 INO80BQ9C086 356 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 XPO7Q9UIA9 1087 aaKnown RBP17.29■□□□□ 0.36
CDC42EP4-201ENST00000335793 ATP5HO75947 161 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 INHBAP08476 426 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 ABHD2P08910 425 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 SP100P23497 879 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 NAMPTP43490 491 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 RAP1GAPP47736 663 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 HIRAP54198 1017 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 GDF10P55107 478 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 PDK4Q16654 411 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 MUM1Q2TAK8 710 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 DARS2Q6PI48 645 aaKnown RBP17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 OTOAQ7RTW8 1153 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 RNF149Q8NC42 400 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 MCUR1Q96AQ8 359 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 NLRP4Q96MN2 994 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 PPP1R16BQ96T49 567 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 TBC1D10AQ9BXI6 508 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 NRBP2Q9NSY0 501 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 H7C0C1 242 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 ALOX15BO15296 676 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 EDF1O60869 148 aaKnown RBP17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 ATP5OP48047 213 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 BACE1P56817 501 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms