RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ROR1Q01973 937 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 EHHADHQ08426 723 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 TDGQ13569 410 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 DHX8Q14562 1220 aaKnown RBP6.85□□□□□ -1.31
SMG1-201ENST00000330588 TMEM132DQ14C87 1099 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 SURF1Q15526 300 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 SPECC1Q5M775 1068 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 RESP18Q5W5W9 173 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 FAM173BQ6P4H8 233 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 HFE2Q6ZVN8 426 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 MTSS1LQ765P7 747 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 CEP57Q86XR8 500 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 HASPINQ8TF76 798 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 WFDC12Q8WWY7 111 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 C18orf25Q96B23 403 aaPredicted RBP6.85□□□□□ -1.31
SMG1-201ENST00000330588 B3GALT6Q96L58 329 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 C7orf25Q9BPX7 421 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 APOL5Q9BWW9 433 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 TRIM9Q9C026 710 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 MRPL44Q9H9J2 332 aaKnown RBP6.85□□□□□ -1.31
SMG1-201ENST00000330588 GOLGA2P5Q9HBQ8 144 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 KIAA1586Q9HCI6 787 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 PANK4Q9NVE7 773 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 GDE1Q9NZC3 331 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 CACNG4Q9UBN1 327 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 AFF4Q9UHB7 1163 aaKnown RBP6.85□□□□□ -1.31
SMG1-201ENST00000330588 RCOR1Q9UKL0 485 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 ATP6V1DQ9Y5K8 247 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 CDY1Q9Y6F8 540 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 FAM237AA0A1B0GTK4 181 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 WDR27A2RRH5 827 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 ANKRD63C9JTQ0 380 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 PIRO00625 290 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 HYAL3O43820 417 aaPredicted RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 FZD6O60353 706 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 N4BP1O75113 896 aaKnown RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 RFPL2O75678 378 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 FGF19O95750 216 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 ODC1P11926 461 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 LAMP2P13473 410 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 RPL17P18621 184 aaKnown RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 TARSP26639 723 aaKnown RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 ADSSP30520 456 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 TNFSF9P41273 254 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 CLCN5P51795 746 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 EPHA5P54756 1037 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 YWHAHQ04917 246 aaPredicted RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 PLD1Q13393 1074 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 CTXN3Q4LDR2 81 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 ADALQ6DHV7 355 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 SHC4Q6S5L8 630 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 CRELD2Q6UXH1 353 aaPredicted RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 DNAJC14Q6Y2X3 702 aaPredicted RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 EPM2AIP1Q7L775 607 aaPredicted RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 DYMQ7RTS9 669 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 PALB2Q86YC2 1186 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 TREML1Q86YW5 311 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 BRSK2Q8IWQ3 736 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 SUGP1Q8IWZ8 645 aaKnown RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 C12orf56Q8IXR9 622 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 C2orf15Q8WU43 125 aaKnown RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 CACTINQ8WUQ7 758 aaKnown RBP6.84□□□□□ -1.31
SMG1-201ENST00000330588 POMGNT1Q8WZA1 660 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 ZNF560Q96MR9 790 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 ZHX3Q9H4I2 956 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 KCNK12Q9HB15 430 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 PIDD1Q9HB75 910 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 SLC2A4RGQ9NR83 387 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 FAM13BQ9NYF5 915 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 TBC1D7Q9P0N9 293 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 WNT16Q9UBV4 365 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 TUBGCP4Q9UGJ1 667 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 ZMYM5Q9UJ78 669 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 FBXL5Q9UKA1 691 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 CDH7Q9ULB5 785 aa6.84□□□□□ -1.31
SMG1-201ENST00000330588 NCOR1O75376 2440 aa6.84□□□□□ -1.32
SMG1-201ENST00000330588 TTC28Q96AY4 2481 aa6.84□□□□□ -1.32
SMG1-201ENST00000330588 FAM86C2PA6NEL3 165 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 ZNF197O14709 1029 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 ADAM12O43184 909 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 EXTL3O43909 919 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 DEAF1O75398 565 aaPredicted RBP6.83□□□□□ -1.32
SMG1-201ENST00000330588 GCNT3O95395 438 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 FAM163BP0C2L3 166 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 SRFP11831 508 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 HARSP12081 509 aaKnown RBP6.83□□□□□ -1.32
SMG1-201ENST00000330588 IDEP14735 1019 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 PTPN2P17706 415 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 NOS3P29474 1203 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 ELF1P32519 619 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 NRLP54845 237 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 LILRA4P59901 499 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 CEBPZQ03701 1054 aaKnown RBP6.83□□□□□ -1.32
SMG1-201ENST00000330588 PSMD2Q13200 908 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 GPR17Q13304 367 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 HTR4Q13639 388 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 BMT2Q1RMZ1 405 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 ZC2HC1CQ53FD0 456 aaPredicted RBP6.83□□□□□ -1.32
SMG1-201ENST00000330588 C9orf57Q5W0N0 161 aa6.83□□□□□ -1.32
SMG1-201ENST00000330588 JADE1Q6IE81 842 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms