RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ARVCFO00192 962 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 TRIM66O15016 1216 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 PSTPIP1O43586 416 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 TCF4P15884 667 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 CLCNKBP51801 687 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 KCTD19Q17RG1 926 aaPredicted RBP21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 OSTM1Q86WC4 334 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 ADGRF2Q8IZF7 708 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 TOP6BLQ8N6T0 577 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 PRELID2Q8N945 189 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 IFT81Q8WYA0 676 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 MCRS1Q96EZ8 462 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 CAPS2Q9BXY5 557 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 PHF24Q9UPV7 400 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 GOLGA6L10A0A0M3HER8 536 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 PIK3R2O00459 728 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 CYB561D2O14569 222 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 HSPA6P17066 643 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 SKOR1P84550 965 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 PIGHQ14442 188 aaPredicted RBP21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 MBTPS1Q14703 1052 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 TRADDQ15628 312 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 ARHGAP17Q68EM7 881 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 PMF1Q6P1K2 205 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 EIF1ADQ8N9N8 165 aaKnown RBP21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 UNC93B1Q9H1C4 597 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 RSAD1Q9HA92 442 aa21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 METTL5Q9NRN9 209 aaKnown RBP21.36■■□□□ 1.01
RIPPLY3-201ENST00000329553 E5RJQ4 531 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 RGS7P49802 495 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 EMC1Q8N766 993 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 NIPA2Q8N8Q9 360 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 CCDC26Q8TAB7 109 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 SLC35F5Q8WV83 523 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 PLVAPQ9BX97 442 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 KBTBD13C9JR72 458 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 PODXLO00592 558 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 RARAP10276 462 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 WARSP23381 471 aaKnown RBP21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 SIX1Q15475 284 aaPredicted RBP21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 ATP13A4Q4VNC1 1196 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 WSCD1Q658N2 575 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 IPO4Q8TEX9 1081 aaKnown RBP21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 PIK3R5Q8WYR1 880 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 PAAF1Q9BRP4 392 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 RASSF4Q9H2L5 321 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 HESX1Q9UBX0 185 aa21.35■■□□□ 1.01
RIPPLY3-201ENST00000329553 FSCN2O14926 492 aa21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 TTI1O43156 1089 aa21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 MYCP01106 439 aaPredicted RBP21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 POMCP01189 267 aa21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 CCDC130P13994 396 aa21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 GJC1P36383 396 aa21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 PPP2R5EQ16537 467 aa21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 MAATS1Q7Z4T9 603 aa21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 RTN4RL1Q86UN2 441 aaPredicted RBP21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 KATNAL2Q8IYT4 538 aa21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 C3orf58Q8NDZ4 430 aa21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 SENP8Q96LD8 212 aa21.34■■□□□ 1.01
RIPPLY3-201ENST00000329553 CASTOR2A6NHX0 329 aa21.33■■□□□ 1.01
RIPPLY3-201ENST00000329553 PSMA2P25787 234 aa21.33■■□□□ 1.01
RIPPLY3-201ENST00000329553 PDE4CQ08493 712 aa21.33■■□□□ 1.01
RIPPLY3-201ENST00000329553 CFAP58Q5T655 872 aa21.33■■□□□ 1.01
RIPPLY3-201ENST00000329553 ECHDC2Q86YB7 292 aa21.33■■□□□ 1.01
RIPPLY3-201ENST00000329553 C10orf67Q8IYJ2 551 aa21.33■■□□□ 1.01
RIPPLY3-201ENST00000329553 FNIP1Q8TF40 1166 aa21.33■■□□□ 1.01
RIPPLY3-201ENST00000329553 PGBD4Q96DM1 585 aa21.33■■□□□ 1.01
RIPPLY3-201ENST00000329553 HERPUD2Q9BSE4 406 aa21.33■■□□□ 1.01
RIPPLY3-201ENST00000329553 BHMG1C9JSJ3 638 aaPredicted RBP21.33■■□□□ 1
RIPPLY3-201ENST00000329553 EIF3HO15372 352 aaKnown RBP eCLIP21.33■■□□□ 1
RIPPLY3-201ENST00000329553 GABBR2O75899 941 aa21.33■■□□□ 1
RIPPLY3-201ENST00000329553 ADORA2BP29275 332 aa21.33■■□□□ 1
RIPPLY3-201ENST00000329553 OR6B2Q6IFH4 312 aa21.33■■□□□ 1
RIPPLY3-201ENST00000329553 FAM183BPQ6ZVS7 135 aa21.33■■□□□ 1
RIPPLY3-201ENST00000329553 ZNF598Q86UK7 904 aaKnown RBP21.33■■□□□ 1
RIPPLY3-201ENST00000329553 ARFGAP1Q8N6T3 406 aa21.33■■□□□ 1
RIPPLY3-201ENST00000329553 MAGOHBQ96A72 148 aaKnown RBP21.33■■□□□ 1
RIPPLY3-201ENST00000329553 SLC4A5Q9BY07 1137 aa21.33■■□□□ 1
RIPPLY3-201ENST00000329553 A6NNZ2 444 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 GABRDO14764 452 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 PHF2O75151 1096 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 ATP2C2O75185 946 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 KRT14P02533 472 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 FAM163BP0C2L3 166 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 SETSIPP0DME0 302 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 RPL9P32969 192 aaKnown RBP21.32■■□□□ 1
RIPPLY3-201ENST00000329553 CDK7P50613 346 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 UPP1Q16831 310 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 TUBB8Q3ZCM7 444 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 FAM102AQ5T9C2 384 aaPredicted RBP21.32■■□□□ 1
RIPPLY3-201ENST00000329553 TXNRD3NBQ6F5E7 133 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 ANKRD52Q8NB46 1076 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 PIWIL1Q96J94 861 aaKnown RBP21.32■■□□□ 1
RIPPLY3-201ENST00000329553 TMEM51Q9NW97 253 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 MTUS1Q9ULD2 1270 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 SKIP12755 728 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 DNAJC21Q5F1R6 531 aaKnown RBP21.32■■□□□ 1
RIPPLY3-201ENST00000329553 ANKS1BQ7Z6G8 1248 aa21.32■■□□□ 1
RIPPLY3-201ENST00000329553 TMEM110Q86TL2 294 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms