RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 TRABD2AQ86V40 505 aa16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 ACTL9Q8TC94 416 aa16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 ZBTB10Q96DT7 871 aa16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 ZNF668Q96K58 619 aaPredicted RBP16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 MAGEB18Q96M61 343 aa16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 ELAC2Q9BQ52 826 aaKnown RBP16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 FDXACB1Q9BRP7 624 aaPredicted RBP16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 SENP1Q9P0U3 644 aa16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 SLC24A2Q9UI40 661 aa16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 ZMYND8Q9ULU4 1186 aaPredicted RBP16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 BARX2Q9UMQ3 279 aaPredicted RBP16.6■□□□□ 0.25
SMARCD2-202ENST00000323347 E7ESA3 106 aa16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 H0YHG0 523 aa16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 PRPF4O43172 522 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 TRUB2O95900 331 aaKnown RBP16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 TSHRP16473 764 aa16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 ARF4P18085 180 aaPredicted RBP16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 IFNAR2P48551 515 aa16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 OTUD4Q01804 1114 aaKnown RBP16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 ZC3H12AQ5D1E8 599 aaKnown RBP16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 NAT8LQ8N9F0 302 aa16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 ACSF2Q96CM8 615 aaPredicted RBP16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 TMEM121Q9BTD3 319 aa16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 METTL5Q9NRN9 209 aaKnown RBP16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 SLC12A4Q9UP95 1085 aa16.59■□□□□ 0.25
SMARCD2-202ENST00000323347 CST8O60676 142 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 ZNF143P52747 638 aaPredicted RBP16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 RBP5P82980 135 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 COL13A1Q5TAT6 717 aaPredicted RBP16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 LCLAT1Q6UWP7 414 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 PPIL6Q8IXY8 311 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 DENND1AQ8TEH3 1009 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 DYDC1Q8WWB3 177 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 HPDLQ96IR7 371 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 PLCD4Q9BRC7 762 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 C16orf70Q9BSU1 422 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 KATNBL1Q9H079 304 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 MIS12Q9H081 205 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 KCNK9Q9NPC2 374 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 ASNSD1Q9NWL6 643 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 PRKAG3Q9UGI9 489 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 HMGXB4Q9UGU5 601 aa16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.25
SMARCD2-202ENST00000323347 A0A1B0GUA9 196 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 EXOC1LA0A1B0GW35 172 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 TCP11X1B4DZS4 312 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 APOC4-APOC2K7ER74 178 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 SGK1O00141 431 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 APOC2P02655 101 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 HOXD8P13378 290 aaPredicted RBP16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 MIPP30301 263 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 TMEM132DQ14C87 1099 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 STILQ15468 1287 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 EFHC2Q5JST6 749 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 CYP4F22Q6NT55 531 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 MTHFD1LQ6UB35 978 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 RGS9BPQ6ZS82 235 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 TRPM8Q7Z2W7 1104 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 AFG1LQ8WV93 481 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 L3MBTL3Q96JM7 780 aaPredicted RBP16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 ZWILCHQ9H900 591 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 SLC40A1Q9NP59 571 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 NKIRAS1Q9NYS0 192 aa16.58■□□□□ 0.24
SMARCD2-202ENST00000323347 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 FAM47DPA6NHR8 397 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 RPL22P35268 128 aaKnown RBP16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 GJA5P36382 358 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 SNAPC2Q13487 334 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 LRRC14Q15048 493 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 EMC1Q8N766 993 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 CPT1BQ92523 772 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 USP6NLQ92738 828 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 GRAMD1AQ96CP6 724 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 CNPY3Q9BT09 278 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 RSAD1Q9HA92 442 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 SSU72Q9NP77 194 aaKnown RBP16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 PNMA3Q9UL41 463 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 USP18Q9UMW8 372 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 SLC45A1Q9Y2W3 748 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 DERAQ9Y315 318 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 UNCXA6NJT0 531 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 C2CD4BA6NLJ0 364 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 RASA4BC9J798 803 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 RASA4O43374 803 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 TSPAN1O60635 241 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 RNF8O76064 485 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 GRM5P41594 1212 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 PLCB3Q01970 1234 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 FASTKD3Q14CZ7 662 aaKnown RBP16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 GALNTL6Q49A17 601 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 MAP1SQ66K74 1059 aaPredicted RBP16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 CYP4V2Q6ZWL3 525 aaPredicted RBP16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 ZNF410Q86VK4 478 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 SRRM1Q8IYB3 904 aaKnown RBP16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 TNS4Q8IZW8 715 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 GPRC5AQ8NFJ5 357 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 HAUS1Q96CS2 278 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 DHRS4Q9BTZ2 278 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 SYNCQ9H7C4 482 aa16.57■□□□□ 0.24
SMARCD2-202ENST00000323347 AGAP1Q9UPQ3 857 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms