RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 PALB2Q86YC2 1186 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 SCG3Q8WXD2 468 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 CISHQ9NSE2 258 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 GPATCH2LQ9NWQ4 482 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 PAK5Q9P286 719 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 MTO1Q9Y2Z2 717 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 NID2Q14112 1375 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 CYP3A7-CYP3A51PA0A087WV96 503 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 KIF1CO43896 1103 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 CSDE1O75534 798 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 DNAJC8O75937 253 aaPredicted RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 ITGB3P05106 788 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 CYP3A7P24462 503 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 ADARB2Q9NS39 739 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 TNPO2O14787 897 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 HBP1O60381 514 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 SETSIPP0DME0 302 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 GHRP10912 638 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 EEF1DP29692 281 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 CDC25CP30307 473 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 INPP1P49441 399 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 ALDH5A1P51649 535 aaPredicted RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 FASTKD1Q53R41 847 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 C9orf131Q5VYM1 1079 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 PIN4Q9Y237 131 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 NR2E1Q9Y466 385 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 HNRNPCL1O60812 293 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 E2F6O75461 281 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 ADRB2P07550 413 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 ZCWPW2Q504Y3 356 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 PRPF39Q86UA1 669 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 NCLNQ969V3 563 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 SPON2Q9BUD6 331 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 PPCSQ9HAB8 311 aa16.05■□□□□ 0.16
GCFC2-201ENST00000321027 SETD1AO15047 1707 aaKnown RBP16.05■□□□□ 0.16
GCFC2-201ENST00000321027 NKRFO15226 690 aaKnown RBP eCLIP16.04■□□□□ 0.16
GCFC2-201ENST00000321027 SNX3O60493 162 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 LCA5LO95447 670 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 KCNA3P22001 575 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 RRP1BQ14684 758 aaKnown RBP16.04■□□□□ 0.16
GCFC2-201ENST00000321027 ATP13A4Q4VNC1 1196 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 OLA1Q9NTK5 396 aaKnown RBP16.04■□□□□ 0.16
GCFC2-201ENST00000321027 ATP8B3O60423 1300 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 ABCC6O95255 1503 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 O00370 1275 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 MAGEB2O15479 319 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 ZC3H11AO75152 810 aaKnown RBP eCLIP16.04■□□□□ 0.16
GCFC2-201ENST00000321027 CYP3A4P08684 503 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 UBTFL6P0CB48 400 aaPredicted RBP16.04■□□□□ 0.16
GCFC2-201ENST00000321027 CLCN3P51790 818 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 NLRP11P59045 1033 aaKnown RBP16.04■□□□□ 0.16
GCFC2-201ENST00000321027 TMEM132DQ14C87 1099 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 CNGA2Q16280 664 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 SAE1Q9UBE0 346 aaPredicted RBP16.04■□□□□ 0.16
GCFC2-201ENST00000321027 PIK3CDO00329 1044 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 CBX6O95503 412 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 DRD4P21917 467 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 PRAMEP78395 509 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 RBP5P82980 135 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 LRRC23Q53EV4 343 aaPredicted RBP16.04■□□□□ 0.16
GCFC2-201ENST00000321027 EFHC2Q5JST6 749 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 RNF217Q8TC41 542 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 ING2Q9H160 280 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 BCAS3Q9H6U6 928 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 TSR3Q9UJK0 312 aaKnown RBP16.04■□□□□ 0.16
GCFC2-201ENST00000321027 RGPD1P0DJD0 1748 aa16.04■□□□□ 0.16
GCFC2-201ENST00000321027 BTNL10A8MVZ5 291 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 MYL2P10916 166 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 CYP2B6P20813 491 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 GPD1P21695 349 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 RAP1GAPP47736 663 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 ELF3P78545 371 aaPredicted RBP16.03■□□□□ 0.16
GCFC2-201ENST00000321027 CNTN2Q02246 1040 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 YTHDF3Q7Z739 585 aaKnown RBP16.03■□□□□ 0.16
GCFC2-201ENST00000321027 FBXO16Q8IX29 292 aaPredicted RBP16.03■□□□□ 0.16
GCFC2-201ENST00000321027 SAMD3Q8N6K7 520 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.03■□□□□ 0.16
GCFC2-201ENST00000321027 MARSP56192 900 aaKnown RBP16.03■□□□□ 0.16
GCFC2-201ENST00000321027 NRBF2Q96F24 287 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 NT5C1AQ9BXI3 368 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 OGTO15294 1046 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 SNHG28P0DPA3 235 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 KCNJ2P63252 427 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 PDCD2Q16342 344 aaPredicted RBP16.03■□□□□ 0.16
GCFC2-201ENST00000321027 LLGL2Q6P1M3 1020 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 HPDLQ96IR7 371 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 SPATC1LQ9H0A9 340 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 FAM96AQ9H5X1 160 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 F8VP50 259 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 CHKAP35790 457 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 ZSWIM2Q8NEG5 633 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 TTC8Q8TAM2 541 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 VPS33BQ9H267 617 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 ROBO3Q96MS0 1386 aa16.03■□□□□ 0.16
GCFC2-201ENST00000321027 ETS1P14921 441 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 ZFXP17010 805 aaPredicted RBP16.02■□□□□ 0.16
GCFC2-201ENST00000321027 MMP14P50281 582 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 GCNT1Q02742 428 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms