RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 HTRA3P83110 453 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 TUSC3Q13454 348 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 MBTPS1Q14703 1052 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 HADHQ16836 314 aaKnown RBP18.79■□□□□ 0.6
RAB39A-201ENST00000320578 PMF1Q6P1K2 205 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 ZDHHC14Q8IZN3 488 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 B3GALNT2Q8NCR0 500 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 JOSD2Q8TAC2 188 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 FAM49BQ9NUQ9 324 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 ASNSD1Q9NWL6 643 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 USTQ9Y2C2 406 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 EFR3BQ9Y2G0 817 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 ARHGEF37A1IGU5 675 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 DPYSL4O14531 572 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 SASH3O75995 380 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 KRT7P08729 469 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 MYBL2P10244 700 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 PLA2G4AP47712 749 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 AFF1P51825 1210 aaKnown RBP18.78■□□□□ 0.6
RAB39A-201ENST00000320578 DR1Q01658 176 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 PDE4CQ08493 712 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 KLF1Q13351 362 aaPredicted RBP18.78■□□□□ 0.6
RAB39A-201ENST00000320578 CASP8Q14790 479 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 WSCD1Q658N2 575 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 FAM126BQ8IXS8 530 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 CASKIN2Q8WXE0 1202 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 MAGOHBQ96A72 148 aaKnown RBP18.78■□□□□ 0.6
RAB39A-201ENST00000320578 CNPY3Q9BT09 278 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 UNC93B1Q9H1C4 597 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 ST7Q9NRC1 585 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 RASAL2Q9UJF2 1139 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 OGDHLQ9ULD0 1010 aa18.78■□□□□ 0.6
RAB39A-201ENST00000320578 UTP11Q9Y3A2 253 aaKnown RBP18.78■□□□□ 0.6
RAB39A-201ENST00000320578 C2CD4BA6NLJ0 364 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 CYP11A1P05108 521 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 PTPN1P18031 435 aaKnown RBP18.77■□□□□ 0.6
RAB39A-201ENST00000320578 SLC6A3Q01959 620 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 FAM102AQ5T9C2 384 aaPredicted RBP18.77■□□□□ 0.6
RAB39A-201ENST00000320578 OR6B2Q6IFH4 312 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 OLFML1Q6UWY5 402 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 FAM183BPQ6ZVS7 135 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 LRRC8DQ7L1W4 858 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 RTN4RL1Q86UN2 441 aaPredicted RBP18.77■□□□□ 0.6
RAB39A-201ENST00000320578 SH3TC2Q8TF17 1288 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 BEGAINQ9BUH8 593 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 OSBPL8Q9BZF1 889 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 FAM114A2Q9NRY5 505 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 DSEQ9UL01 958 aa18.77■□□□□ 0.6
RAB39A-201ENST00000320578 PITPNM1O00562 1244 aa18.77■□□□□ 0.59
RAB39A-201ENST00000320578 XPO1O14980 1071 aaKnown RBP18.77■□□□□ 0.59
RAB39A-201ENST00000320578 LRCH4O75427 683 aa18.77■□□□□ 0.59
RAB39A-201ENST00000320578 GPD1P21695 349 aa18.77■□□□□ 0.59
RAB39A-201ENST00000320578 GBP1P32455 592 aa18.77■□□□□ 0.59
RAB39A-201ENST00000320578 COILP38432 576 aaPredicted RBP18.77■□□□□ 0.59
RAB39A-201ENST00000320578 PTGIRP43119 386 aa18.77■□□□□ 0.59
RAB39A-201ENST00000320578 MRPS25P82663 173 aaKnown RBP18.77■□□□□ 0.59
RAB39A-201ENST00000320578 PLCB3Q01970 1234 aa18.77■□□□□ 0.59
RAB39A-201ENST00000320578 SLC25A11Q02978 314 aaKnown RBP18.77■□□□□ 0.59
RAB39A-201ENST00000320578 DSTYKQ6XUX3 929 aa18.77■□□□□ 0.59
RAB39A-201ENST00000320578 DUSP16Q9BY84 665 aa18.77■□□□□ 0.59
RAB39A-201ENST00000320578 ELAC1Q9H777 363 aaKnown RBP18.77■□□□□ 0.59
RAB39A-201ENST00000320578 FEZ2Q9UHY8 353 aaPredicted RBP18.77■□□□□ 0.59
RAB39A-201ENST00000320578 CDH9Q9ULB4 789 aa18.77■□□□□ 0.59
RAB39A-201ENST00000320578 TTI1O43156 1089 aa18.76■□□□□ 0.59
RAB39A-201ENST00000320578 RNF8O76064 485 aa18.76■□□□□ 0.59
RAB39A-201ENST00000320578 SSR1P43307 286 aaKnown RBP18.76■□□□□ 0.59
RAB39A-201ENST00000320578 CARSP49589 748 aaKnown RBP18.76■□□□□ 0.59
RAB39A-201ENST00000320578 SLC8A3P57103 927 aa18.76■□□□□ 0.59
RAB39A-201ENST00000320578 DCLRE1AQ6PJP8 1040 aa18.76■□□□□ 0.59
RAB39A-201ENST00000320578 SYDE1Q6ZW31 735 aaPredicted RBP18.76■□□□□ 0.59
RAB39A-201ENST00000320578 ARFGAP1Q8N6T3 406 aa18.76■□□□□ 0.59
RAB39A-201ENST00000320578 SLC2A14Q8TDB8 520 aa18.76■□□□□ 0.59
RAB39A-201ENST00000320578 SLITRK1Q96PX8 696 aa18.76■□□□□ 0.59
RAB39A-201ENST00000320578 ERP44Q9BS26 406 aa18.76■□□□□ 0.59
RAB39A-201ENST00000320578 ACBD3Q9H3P7 528 aa18.76■□□□□ 0.59
RAB39A-201ENST00000320578 KANSL3Q9P2N6 904 aa18.76■□□□□ 0.59
RAB39A-201ENST00000320578 TCRBV7S2A1N4TA0A589 114 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 M0QZQ0 153 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 ODC1P11926 461 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 CCDC130P13994 396 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 PCSK1P29120 753 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 CCNG2Q16589 344 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 DUPD1Q68J44 220 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 CCDC137Q6PK04 289 aaKnown RBP18.75■□□□□ 0.59
RAB39A-201ENST00000320578 GLB1LQ6UWU2 654 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 SLC26A9Q7LBE3 791 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 ADAT2Q7Z6V5 191 aaKnown RBP18.75■□□□□ 0.59
RAB39A-201ENST00000320578 KRT222Q8N1A0 295 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 C3orf58Q8NDZ4 430 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 KCTD13Q8WZ19 329 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 FAM129AQ9BZQ8 928 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 UBXN6Q9BZV1 441 aa18.75■□□□□ 0.59
RAB39A-201ENST00000320578 DDX43Q9NXZ2 648 aaKnown RBP18.75■□□□□ 0.59
RAB39A-201ENST00000320578 TULP2O00295 520 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 PAPSS1O43252 624 aaPredicted RBP18.74■□□□□ 0.59
RAB39A-201ENST00000320578 HCRTO43612 131 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 GABBR2O75899 941 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 RALAP11233 206 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 DESP17661 470 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 TAZQ16635 292 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms