RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CARD9Q9H257 536 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 KCNK9Q9NPC2 374 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 ARID2Q68CP9 1835 aa8.02□□□□□ -1.13
TRIM55-202ENST00000315962 I3L4J1 428 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 SPTLC1O15269 473 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 MCF2P10911 925 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 DARSP14868 501 aaKnown RBP8.01□□□□□ -1.13
TRIM55-202ENST00000315962 MMP8P22894 467 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 PSMC1P62191 440 aaKnown RBP8.01□□□□□ -1.13
TRIM55-202ENST00000315962 PURAQ00577 322 aaKnown RBP8.01□□□□□ -1.13
TRIM55-202ENST00000315962 SOX4Q06945 474 aaPredicted RBP8.01□□□□□ -1.13
TRIM55-202ENST00000315962 SEL1L2Q5TEA6 688 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 DNAJC24Q6P3W2 148 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 ZDHHC24Q6UX98 284 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 LRIG3Q6UXM1 1119 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 CCDC63Q8NA47 563 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 CXorf38Q8TB03 319 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 PAIP2Q9BPZ3 127 aaKnown RBP8.01□□□□□ -1.13
TRIM55-202ENST00000315962 FAM167BQ9BTA0 163 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 MAGEB5Q9BZ81 275 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 FAM129AQ9BZQ8 928 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 MAF1Q9H063 256 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 RNF186Q9NXI6 227 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 NME7Q9Y5B8 376 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 PCDHA3Q9Y5H8 950 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 MRPL42Q9Y6G3 142 aaKnown RBP8.01□□□□□ -1.13
TRIM55-202ENST00000315962 EYSQ5T1H1 3165 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 PIAS1O75925 651 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 ATP6V1G2O95670 118 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 ERBB2P04626 1255 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 CD48P09326 243 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 ZSCAN5DPP0CG00 497 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 ADORA2BP29275 332 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 PLCB3Q01970 1234 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 PTP4A2Q12974 167 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 ERMARDQ5T6L9 678 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 LIN9Q5TKA1 542 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 GDF6Q6KF10 455 aaPredicted RBP8.01□□□□□ -1.13
TRIM55-202ENST00000315962 C11orf63Q6NUN7 778 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 FAM47EQ6ZV65 393 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 YTHDF3Q7Z739 585 aaKnown RBP8.01□□□□□ -1.13
TRIM55-202ENST00000315962 RASGEF1CQ8N431 466 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 NETO2Q8NC67 525 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 TMEM35BQ8NCS4 154 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 TMEM176AQ96HP8 235 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 PAAF1Q9BRP4 392 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 UVRAGQ9P2Y5 699 aa8.01□□□□□ -1.13
TRIM55-202ENST00000315962 SYNJ2BP-COX16A0A087WUM0 186 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 GOLGA6L10A0A0M3HER8 536 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 SMIM28A0A1B0GU29 152 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 C17orf102A2RUQ5 167 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 LRRD1A4D1F6 860 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 CCT8L1PA6NM43 557 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 TCP11X1B4DZS4 312 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 MICAL2O94851 1124 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 SLC10A3P09131 477 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 KRT3P12035 628 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 CCDC130P13994 396 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 ETS1P14921 441 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 CYP3A5P20815 502 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 CPT1AP50416 773 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 PTPN11Q06124 597 aaPredicted RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 CACNB2Q08289 660 aaPredicted RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 C15orf59Q2T9L4 293 aaPredicted RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 SGO2Q562F6 1265 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 PPP1R26Q5T8A7 1209 aaPredicted RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 SLC27A1Q6PCB7 646 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 CTU1Q7Z7A3 348 aaKnown RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 SLC13A5Q86YT5 568 aaPredicted RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 FEZF2Q8TBJ5 459 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 CLEC4CQ8WTT0 213 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 NSMCE1Q8WV22 266 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 ATXN2LQ8WWM7 1075 aaKnown RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 ERP44Q9BS26 406 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 METTL5Q9NRN9 209 aaKnown RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 TRMT13Q9NUP7 481 aaKnown RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 PARVAQ9NVD7 372 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 COX16Q9P0S2 106 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 TSPAN16Q9UKR8 245 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 TTC7AQ9ULT0 858 aaPredicted RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 E5RJQ4 531 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 F8W810 466 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 ASGR1P07306 291 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 EZRP15311 586 aaKnown RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 THPOP40225 353 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 ERFP50548 548 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 ZNF132P52740 706 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 POU5F1Q01860 360 aaKnown RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 NUGGCQ68CJ6 796 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 SCYL2Q6P3W7 929 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 NOTUMQ6P988 496 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 FAM43BQ6ZT52 329 aaPredicted RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 SPATS2Q86XZ4 545 aaKnown RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 GLIS1Q8NBF1 620 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 AGAP11Q8TF27 550 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 HSPH1Q92598 858 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 ZNF317Q96PQ6 595 aaPredicted RBP8□□□□□ -1.13
TRIM55-202ENST00000315962 APBA2Q99767 749 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 WNT8AQ9H1J5 351 aa8□□□□□ -1.13
TRIM55-202ENST00000315962 ZDHHC18Q9NUE0 388 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms