RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 ADAM9Q13443 819 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 ANGPT1Q15389 498 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 EDRF1Q3B7T1 1238 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 ZNF658Q5TYW1 1059 aaPredicted RBP17.39■□□□□ 0.37
LSM1-201ENST00000311351 TXNDC8Q6A555 127 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 VSTM1Q6UX27 236 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 INTS8Q75QN2 995 aaKnown RBP17.39■□□□□ 0.37
LSM1-201ENST00000311351 YAF2Q8IY57 180 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 CMTM8Q8IZV2 173 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 MAB21L3Q8N8X9 362 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 B3GALNT2Q8NCR0 500 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 SPATA20Q8TB22 786 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 MRPS31Q92665 395 aaKnown RBP17.39■□□□□ 0.37
LSM1-201ENST00000311351 IRF7Q92985 503 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 SMARCE1Q969G3 411 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 TRMT2BQ96GJ1 504 aaKnown RBP17.39■□□□□ 0.37
LSM1-201ENST00000311351 ZFYVE19Q96K21 471 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 TIGD1Q96MW7 591 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 GSDMAQ96QA5 445 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 HMGXB4Q9UGU5 601 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 CIZ1Q9ULV3 898 aaPredicted RBP17.39■□□□□ 0.37
LSM1-201ENST00000311351 CCL26Q9Y258 94 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 MYH10P35580 1976 aa17.39■□□□□ 0.37
LSM1-201ENST00000311351 FAM170BA6NMN3 283 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 F8VP50 259 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 IKBKBO14920 756 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 SMC2O95347 1197 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 ASS1P00966 412 aaKnown RBP17.38■□□□□ 0.37
LSM1-201ENST00000311351 FAM163BP0C2L3 166 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 GRIK1P39086 918 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 ASPAP45381 313 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 MRE11P49959 708 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 PMS1P54277 932 aaKnown RBP17.38■□□□□ 0.37
LSM1-201ENST00000311351 USP46P62068 366 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 ORC1Q13415 861 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 TAS1R2Q8TE23 839 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 MYRFLQ96LU7 910 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 B3GNT5Q9BYG0 378 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 UXTQ9UBK9 157 aaPredicted RBP17.38■□□□□ 0.37
LSM1-201ENST00000311351 NDRG2Q9UN36 371 aaKnown RBP17.38■□□□□ 0.37
LSM1-201ENST00000311351 PIAS3Q9Y6X2 628 aa17.38■□□□□ 0.37
LSM1-201ENST00000311351 TRIM49BA6NDI0 452 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 CHADO15335 359 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 KINO60870 393 aaKnown RBP17.37■□□□□ 0.37
LSM1-201ENST00000311351 ANXA13P27216 316 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 WEE1P30291 646 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 AVPR1AP37288 418 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 SOX9P48436 509 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 SGSM1Q2NKQ1 1148 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 ISM2Q6H9L7 571 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 ZNF852Q6ZMS4 543 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 TTC8Q8TAM2 541 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 RIN3Q8TB24 985 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 BPIFB1Q8TDL5 484 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 USP13Q92995 863 aaPredicted RBP17.37■□□□□ 0.37
LSM1-201ENST00000311351 SPATA17Q96L03 361 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 ELOVL4Q9GZR5 314 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 TRPC7Q9HCX4 862 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 TRPV5Q9NQA5 729 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 OBP2AQ9NY56 170 aa17.37■□□□□ 0.37
LSM1-201ENST00000311351 VPS13AQ96RL7 3174 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 MYO16Q9Y6X6 1858 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 TRIM66O15016 1216 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 P4HA1P13674 534 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 DDX6P26196 483 aaKnown RBP eCLIP17.36■□□□□ 0.37
LSM1-201ENST00000311351 NOP14P78316 857 aaKnown RBP17.36■□□□□ 0.37
LSM1-201ENST00000311351 COBLL1Q53SF7 1204 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 ACOT1Q86TX2 421 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 FAM35AQ86V20 835 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 MON1AQ86VX9 555 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 ADSSL1Q8N142 457 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 CELF5Q8N6W0 485 aaKnown RBP17.36■□□□□ 0.37
LSM1-201ENST00000311351 CSGALNACT1Q8TDX6 532 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 TAF4BQ92750 862 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 SLC22A12Q96S37 553 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 IRF2BPLQ9H1B7 796 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 APOBEC3GQ9HC16 384 aaKnown RBP17.36■□□□□ 0.37
LSM1-201ENST00000311351 HOOK1Q9UJC3 728 aaKnown RBP17.36■□□□□ 0.37
LSM1-201ENST00000311351 MAN1B1Q9UKM7 699 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 ZFHX2Q9C0A1 2572 aaPredicted RBP17.36■□□□□ 0.37
LSM1-201ENST00000311351 MYO15AQ9UKN7 3530 aa17.36■□□□□ 0.37
LSM1-201ENST00000311351 C2orf78A6NCI8 922 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 CETN3O15182 167 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 EPB41P11171 864 aaKnown RBP17.35■□□□□ 0.37
LSM1-201ENST00000311351 CCDC130P13994 396 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 NDST1P52848 882 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 TNK2Q07912 1038 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 ARHGAP29Q52LW3 1261 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 ANKRD40Q6AI12 368 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 DENND5BQ6ZUT9 1274 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 C8orf48Q96LL4 319 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 TSG101Q99816 390 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 MED10Q9BTT4 135 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 BCO2Q9BYV7 579 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 OSBPL6Q9BZF3 934 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 TMEM8AQ9HCN3 771 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 GTSE1Q9NYZ3 720 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 ZMYM5Q9UJ78 669 aa17.35■□□□□ 0.37
LSM1-201ENST00000311351 ATP8B3O60423 1300 aa17.34■□□□□ 0.37
LSM1-201ENST00000311351 CKMP06732 381 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms