RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 SEC14L1Q92503 715 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 FAM161BQ96MY7 647 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 GAD1Q99259 594 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 HINFPQ9BQA5 517 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 MIS12Q9H081 205 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
TRIM40-205ENST00000307859 MTUS1Q9ULD2 1270 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 PATJQ8NI35 1801 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 A0A0U1RQF3 1178 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 A0A1W2PQ45 241 aaPredicted RBP12.52□□□□□ -0.4
TRIM40-205ENST00000307859 A0A1W2PQY0 241 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 TCRBV7S2A1N4TA0A589 114 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 FAM187AA6NFU0 413 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 ARL5CA6NH57 179 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 A8MXQ7 604 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 GOLGA8SH3BPF8 625 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 THP07101 528 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 RFC1P35251 1148 aaPredicted RBP12.52□□□□□ -0.4
TRIM40-205ENST00000307859 PLA2G4AP47712 749 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 CARSP49589 748 aaKnown RBP12.52□□□□□ -0.4
TRIM40-205ENST00000307859 NNTQ13423 1086 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 DHX34Q14147 1143 aaKnown RBP12.52□□□□□ -0.4
TRIM40-205ENST00000307859 ZNF618Q5T7W0 954 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 ADAT2Q7Z6V5 191 aaKnown RBP12.52□□□□□ -0.4
TRIM40-205ENST00000307859 ADGRF2Q8IZF7 708 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 KRT222Q8N1A0 295 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 JOSD2Q8TAC2 188 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 STK32AQ8WU08 396 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 SLC35F5Q8WV83 523 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 MAIP1Q8WWC4 291 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 LPPQ93052 612 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 RUNDC3BQ96NL0 473 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 UBXN6Q9BZV1 441 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 DNAI2Q9GZS0 605 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 DPEP3Q9H4B8 488 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 SYNCQ9H7C4 482 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 VIPAS39Q9H9C1 493 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 METTL5Q9NRN9 209 aaKnown RBP12.52□□□□□ -0.4
TRIM40-205ENST00000307859 MIOSQ9NXC5 875 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 PCYOX1Q9UHG3 505 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 RAPGEFL1Q9UHV5 662 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 USTQ9Y2C2 406 aa12.52□□□□□ -0.4
TRIM40-205ENST00000307859 NLRC5Q86WI3 1866 aa12.52□□□□□ -0.41
TRIM40-205ENST00000307859 A0A0U1RQG5 324 aaPredicted RBP12.51□□□□□ -0.41
TRIM40-205ENST00000307859 ESYT3A0FGR9 886 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 F8VP50 259 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 TTI1O43156 1089 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 HUS1O60921 280 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 RARAP10276 462 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 CKBP12277 381 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 SKIP12755 728 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 GNL1P36915 607 aaPredicted RBP12.51□□□□□ -0.41
TRIM40-205ENST00000307859 AFF1P51825 1210 aaKnown RBP12.51□□□□□ -0.41
TRIM40-205ENST00000307859 CUL1Q13616 776 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 SLC4A5Q9BY07 1137 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 SNX25Q9H3E2 840 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 FAM49BQ9NUQ9 324 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 HESX1Q9UBX0 185 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 OGDHLQ9ULD0 1010 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 PHF24Q9UPV7 400 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 ARIH1Q9Y4X5 557 aaPredicted RBP12.51□□□□□ -0.41
TRIM40-205ENST00000307859 E5RJQ4 531 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 GABRDO14764 452 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 INPPL1O15357 1258 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 HCRTO43612 131 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 TCF4P15884 667 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 PSMA2P25787 234 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 LMO2P25791 158 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 ECHS1P30084 290 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 RPL9P32969 192 aaKnown RBP12.51□□□□□ -0.41
TRIM40-205ENST00000307859 PTGIRP43119 386 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 RPL34P49207 117 aaKnown RBP12.51□□□□□ -0.41
TRIM40-205ENST00000307859 FNTAP49354 379 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 SCNN1GP51170 649 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 DR1Q01658 176 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
TRIM40-205ENST00000307859 ACAP1Q15027 740 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 TTC27Q6P3X3 843 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 FAM183BPQ6ZVS7 135 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 POLNQ7Z5Q5 900 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 TMEM110Q86TL2 294 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 OSTM1Q86WC4 334 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 MAGOHBQ96A72 148 aaKnown RBP12.51□□□□□ -0.41
TRIM40-205ENST00000307859 PGBD4Q96DM1 585 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 ADAM2Q99965 735 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 HERPUD2Q9BSE4 406 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 TRPV6Q9H1D0 765 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 PLEKHA4Q9H4M7 779 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 LRRC19Q9H756 370 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 RSAD1Q9HA92 442 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 CYLDQ9NQC7 956 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 STARD7Q9NQZ5 370 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 NFU1Q9UMS0 254 aa12.51□□□□□ -0.41
TRIM40-205ENST00000307859 ARVCFO00192 962 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 TULP2O00295 520 aa12.5□□□□□ -0.41
TRIM40-205ENST00000307859 PODXLO00592 558 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms