RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TWNKQ96RR1 684 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 B3GNT5Q9BYG0 378 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ZNF518BQ9C0D4 1074 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 VPS16Q9H269 839 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 UBE2TQ9NPD8 197 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 DMAP1Q9NPF5 467 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 AVENQ9NQS1 362 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 APEX2Q9UBZ4 518 aa11.68□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 LOC730098B7Z3J9 87 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 F8VP50 259 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 KRT5P13647 590 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CD19P15391 556 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SLC9A1P19634 815 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 COPB1P53618 953 aaKnown RBP11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 RAD23BP54727 409 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SLC8A3P57103 927 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 NCAPHQ15003 741 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FILIP1LQ4L180 1135 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SGO2Q562F6 1265 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SDHAF4Q5VUM1 108 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 TMEM270Q6UE05 265 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 TMC8Q8IU68 726 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 DHX40Q8IX18 779 aaKnown RBP11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 HS6ST3Q8IZP7 471 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 C12orf29Q8N999 325 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GPR152Q8TDT2 470 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CYFIP2Q96F07 1278 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SPATA17Q96L03 361 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 C8orf48Q96LL4 319 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 PCMTD1Q96MG8 357 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 LSM14BQ9BX40 385 aaKnown RBP11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SLITRK6Q9H5Y7 841 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 LIMA1Q9UHB6 759 aaKnown RBP11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CDH7Q9ULB5 785 aa11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ZFP37Q9Y6Q3 630 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 A0A1W2PRU2 124 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 C19orf67A6NJJ6 358 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SLC38A8A6NNN8 435 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 RTN3O95197 1032 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 PAEPP09466 180 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 VDRP11473 427 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ZNF18P17022 549 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CEBPBP17676 345 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 RFX1P22670 979 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 PON1P27169 355 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GABRR2P28476 465 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 EPHA5P54756 1037 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 IFRD2Q12894 506 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ARHGAP44Q17R89 818 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SLC5A9Q2M3M2 681 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 PRSS36Q5K4E3 855 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 PHLDB3Q6NSJ2 640 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 DENND5BQ6ZUT9 1274 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MTSS1LQ765P7 747 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ZDHHC14Q8IZN3 488 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FUKQ8N0W3 1084 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SLC4A11Q8NBS3 891 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 RBBP8NLQ8NC74 664 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 STKLD1Q8NE28 680 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ITFG1Q8TB96 612 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 WHAMMQ8TF30 809 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 FGF13Q92913 245 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 KAT5Q92993 513 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 JAKMIP2Q96AA8 810 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MYADMQ96S97 322 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 HNRNPABQ99729 332 aaKnown RBP11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ATXN3LQ9H3M9 355 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 TSPY26PQ9H489 355 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 CBX8Q9HC52 389 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GDE1Q9NZC3 331 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 HESX1Q9UBX0 185 aa11.66□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 XIRP2A4UGR9 3374 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 LGALS16A8MUM7 142 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 NOL4O94818 638 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MICAL2O94851 1124 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SERPINC1P01008 464 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 NPR3P17342 541 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 USP8P40818 1118 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MAP3K7CLP57077 242 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 UBXN1Q04323 297 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 RAPGEF1Q13905 1077 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 STILQ15468 1287 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 TEAD2Q15562 447 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 PPP1R26Q5T8A7 1209 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ARHGAP17Q68EM7 881 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GJB7Q6PEY0 223 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 LRSAM1Q6UWE0 723 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 NPAS3Q8IXF0 933 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 UBR7Q8N806 425 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 MRPS31Q92665 395 aaKnown RBP11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 TCEAL4Q96EI5 215 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 TRMT2BQ96GJ1 504 aaKnown RBP11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 KREMEN1Q96MU8 473 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 SLITRK1Q96PX8 696 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 COL25A1Q9BXS0 654 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 GPR88Q9GZN0 384 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 ZNF334Q9HCZ1 680 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 EPS15L1Q9UBC2 864 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 KIAA1257Q9ULG3 409 aa11.65□□□□□ -0.54
CSPG4P1Y-201ENST00000306641 LAMP2P13473 410 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms