RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 SLC2A14Q8TDB8 520 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 RAPGEF5Q92565 580 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 L3MBTL3Q96JM7 780 aaPredicted RBP9.43□□□□□ -0.9
SEC16A-201ENST00000277537 CPXM1Q96SM3 734 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 NEUROG2Q9H2A3 272 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 PABPC3Q9H361 631 aaKnown RBP9.43□□□□□ -0.9
SEC16A-201ENST00000277537 XPNPEP3Q9NQH7 507 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 HMGXB4Q9UGU5 601 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 KPNA7A9QM74 516 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 CAND2O75155 1236 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 MOCS2O96007 188 aaPredicted RBP9.43□□□□□ -0.9
SEC16A-201ENST00000277537 APRTP07741 180 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 ELNP15502 786 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 ACO1P21399 889 aaKnown RBP9.43□□□□□ -0.9
SEC16A-201ENST00000277537 MIPP30301 263 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 NUMBP49757 651 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 IRAK1P51617 712 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 SV2CQ496J9 727 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 GKAP1Q5VSY0 366 aaPredicted RBP9.43□□□□□ -0.9
SEC16A-201ENST00000277537 TAPT1Q6NXT6 567 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 FOXR1Q6PIV2 292 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 TMC3Q7Z5M5 1100 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 C3orf20Q8ND61 904 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.43□□□□□ -0.99e-10■■■■■ 79.8
SEC16A-201ENST00000277537 DCLK3Q9C098 648 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 RAB6BQ9NRW1 208 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 LRFN2Q9ULH4 789 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 R3HDM2Q9Y2K5 976 aaKnown RBP9.43□□□□□ -0.9
SEC16A-201ENST00000277537 CNTNAP2Q9UHC6 1331 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 INHBAP08476 426 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 UNGP13051 313 aaPredicted RBP9.43□□□□□ -0.9
SEC16A-201ENST00000277537 SULT1E1P49888 294 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 ZBTB16Q05516 673 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 AP1B1Q10567 949 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 CCDC91Q7Z6B0 441 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 CD302Q8IX05 232 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 CACNA2D3Q8IZS8 1091 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 MRPL45Q9BRJ2 306 aaKnown RBP9.43□□□□□ -0.9
SEC16A-201ENST00000277537 DDX23Q9BUQ8 820 aaKnown RBP9.43□□□□□ -0.9
SEC16A-201ENST00000277537 ELOVL4Q9GZR5 314 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 IFT122Q9HBG6 1241 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 CACNG4Q9UBN1 327 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 SPAG7O75391 227 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 BRAFP15056 766 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 CA4P22748 312 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 MLH1P40692 756 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 MSH2P43246 934 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 ARL4CP56559 192 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 STILQ15468 1287 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 OLFML2BQ68BL8 750 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 MON1BQ7L1V2 547 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 PHF13Q86YI8 300 aaPredicted RBP9.42□□□□□ -0.9
SEC16A-201ENST00000277537 SMC6Q96SB8 1091 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 LPIN3Q9BQK8 851 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 B3GNT5Q9BYG0 378 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 CDHR5Q9HBB8 845 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 IGKV6D-21A0A0A0MT36 114 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 GOLGA8RI6L899 631 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 PIGRP01833 764 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 THP07101 528 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 SAT1P21673 171 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 MAP3K7CLP57077 242 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 HIF1AQ16665 826 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 SCARA3Q6AZY7 606 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 DNAAF3Q8N9W5 541 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 ADAM32Q8TC27 787 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 GLT1D1Q96MS3 346 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 TWNKQ96RR1 684 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 CDC42EP4Q9H3Q1 356 aaKnown RBP9.42□□□□□ -0.9
SEC16A-201ENST00000277537 STAP1Q9ULZ2 295 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 CDY2AQ9Y6F7 541 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 APOL1O14791 398 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 CPP00450 1065 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 IQCF3P0C7M6 154 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 HSPA9P38646 679 aaKnown RBP9.42□□□□□ -0.9
SEC16A-201ENST00000277537 ITKQ08881 620 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 SNX17Q15036 470 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 MDH1BQ5I0G3 518 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 PPP1R26Q5T8A7 1209 aaPredicted RBP9.42□□□□□ -0.9
SEC16A-201ENST00000277537 TTC27Q6P3X3 843 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 ILDR2Q71H61 639 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 RASGEF1CQ8N431 466 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 SLC7A14Q8TBB6 771 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 TPX2Q9ULW0 747 aaKnown RBP9.42□□□□□ -0.9
SEC16A-201ENST00000277537 STXBP5LQ9Y2K9 1186 aa9.42□□□□□ -0.9
SEC16A-201ENST00000277537 POLR2AP24928 1970 aaKnown RBP9.42□□□□□ -0.9
SEC16A-201ENST00000277537 DNAJC25-GNG10A0A024R161 153 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 PAEPP09466 180 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 SRGAP2BP0DMP2 458 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 DARSP14868 501 aaKnown RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 TCF4P15884 667 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 MAGEA4P43358 317 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 RAD23BP54727 409 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 CAV1Q03135 178 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 CRHR2Q13324 411 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 CCNG2Q16589 344 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 NUGGCQ68CJ6 796 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 FAM47EQ6ZV65 393 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 SOCS4Q8WXH5 440 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms