RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 GPD1LQ8N335 351 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 CPT1BQ92523 772 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 KLHL4Q9C0H6 718 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 SUDS3Q9H7L9 328 aaPredicted RBP12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 GMEB1Q9Y692 573 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 TMEM191CA6NGB0 347 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 TMEM191BP0C7N4 346 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 GARTP22102 1010 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 GNA15P30679 374 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 YWHABP31946 246 aaKnown RBP12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 CPA2P48052 419 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 BBS9Q3SYG4 887 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 LLGL2Q6P1M3 1020 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 DHDDSQ86SQ9 333 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 PRPF39Q86UA1 669 aaKnown RBP12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 CERS5Q8N5B7 392 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 TMEM161BQ8NDZ6 487 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 DGCR14Q96DF8 476 aaKnown RBP12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 PI4K2AQ9BTU6 479 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 GINM1Q9NU53 330 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 SOX13Q9UN79 622 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 IVNS1ABPQ9Y6Y0 642 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 DDX39AO00148 427 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 BUD23O43709 281 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 RNASEH1O60930 286 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 KRT37O76014 449 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 SERPINA6P08185 405 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 SETSIPP0DME0 302 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 PYGBP11216 843 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 VAV1P15498 845 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 STIP1P31948 543 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 ABCD1P33897 745 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 CDKN2BP42772 138 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 UBXN2AP68543 259 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 TMPRSS15P98073 1019 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 KDSRQ06136 332 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 ATP13A4Q4VNC1 1196 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 C2CD6Q53TS8 623 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 EFHC1Q5JVL4 640 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 FAM102BQ5T8I3 360 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 TTC39BQ5VTQ0 682 aaPredicted RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 PRR5LQ6MZQ0 368 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 FAM43BQ6ZT52 329 aaPredicted RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 SPATA24Q86W54 205 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 CHURC1Q8WUH1 139 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 SPIRE2Q8WWL2 714 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 ZC3H12CQ9C0D7 883 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 KLHL11Q9NVR0 708 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 AGTPBP1Q9UPW5 1226 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 PCDHB4Q9Y5E5 795 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 NRAPQ86VF7 1730 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 BANF1O75531 89 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 TMCC1O94876 653 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 CALCAP01258 141 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 IMPDH2P12268 514 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 TAL1P17542 331 aaPredicted RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 ZFPM1Q8IX07 1006 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 C4orf19Q8IY42 314 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 SERAC1Q96JX3 654 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 BTBD9Q96Q07 612 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 MRIQ9BWK5 157 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 C12orf65Q9H3J6 166 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 EBF3Q9H4W6 596 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 KMT5AQ9NQR1 393 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 ANKEF1Q9NU02 776 aa12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 XPO7Q9UIA9 1087 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-201ENST00000263780 KLHL2O95198 593 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 TBXAS1P24557 533 aaPredicted RBP12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 HOXA10P31260 410 aaPredicted RBP12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 CRKP46108 304 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 FAAP100Q0VG06 881 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 MSS51Q4VC12 460 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 HSP90AA5PQ58FG0 334 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 DCUN1D2Q6PH85 259 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 C15orf39Q6ZRI6 1047 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 SH2D5Q6ZV89 423 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 POLNQ7Z5Q5 900 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 SLC26A11Q86WA9 606 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 TREML1Q86YW5 311 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 RBM12BQ8IXT5 1001 aaKnown RBP12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 RILPQ96NA2 401 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 SRPK1Q96SB4 655 aaKnown RBP12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 CCDC106Q9BWC9 280 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 IDI2Q9BXS1 227 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 PTTG2Q9NZH5 202 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 PPM1HQ9ULR3 514 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 ZNRF3Q9ULT6 936 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 BTBD19C9JJ37 291 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 RIMBP2O15034 1052 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 AP1G1O43747 822 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 ASLP04424 464 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 SNRPAP09012 282 aaKnown RBP12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 AOC1P19801 751 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 CHN2P52757 468 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 WASHC5Q12768 1159 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms