RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PMF1Q6P1K2 205 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 H2AFVQ71UI9 128 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 FAM35AQ86V20 835 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 MCOLN2Q8IZK6 566 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ANKRD52Q8NB46 1076 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 TMEM35BQ8NCS4 154 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 SPATA18Q8TC71 538 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 CPXM1Q96SM3 734 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 KCNK16Q96T55 309 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 HNRNPABQ99729 332 aaKnown RBP10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ZCWPW1Q9H0M4 648 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 LHX5Q9H2C1 402 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 KRT82Q9NSB4 513 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 MYO1AQ9UBC5 1043 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 GUCA1BQ9UMX6 200 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 PAXBP1Q9Y5B6 917 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 PCDHGC5Q9Y5F6 944 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 CDY1Q9Y6F8 540 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ZSCAN12O43309 604 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 AP1G2O75843 785 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 VNN2O95498 520 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 CYP2F1P24903 491 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 DNAJB1P25685 340 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 CDH5P33151 784 aaPredicted RBP10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 OR1D2P34982 312 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 CA8P35219 290 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 NSFP46459 744 aaKnown RBP10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 GLUD2P49448 558 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 MAP3K7CLP57077 242 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 ERVFC1P60507 584 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 KRT17Q04695 432 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 PTP4A2Q12974 167 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 PSMD5Q16401 504 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 PTPN20Q4JDL3 420 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 TRIM72Q6ZMU5 477 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 CLEC20AQ6ZU45 233 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 ANKS3Q6ZW76 656 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 MON1BQ7L1V2 547 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 ERICH1Q86X53 443 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 TTC9BQ8N6N2 239 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 ATAD1Q8NBU5 361 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 STKLD1Q8NE28 680 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 FBXO22Q8NEZ5 403 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 ZNF653Q96CK0 615 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 SMOQ99835 787 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 CLSTN3Q9BQT9 956 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 HERC2P3Q9BVR0 1158 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 DUSP16Q9BY84 665 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 PBX4Q9BYU1 374 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 NKX2-4Q9H2Z4 354 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 ST7Q9NRC1 585 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 ABI2Q9NYB9 513 aaPredicted RBP10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 ADAM22Q9P0K1 906 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 HESX1Q9UBX0 185 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 SLC27A5Q9Y2P5 690 aa10.3□□□□□ -0.76
SNRNP40-201ENST00000263694 CHD9Q3L8U1 2897 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 MACROD2A1Z1Q3 448 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 H7C4K7 107 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 PJA2O43164 708 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 BUB1O43683 1085 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 SOAT2O75908 522 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 LSM8O95777 96 aaKnown RBP10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 ERBB2P04626 1255 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 CPB1P15086 417 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 RRM1P23921 792 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 PPM1AP35813 382 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 GPR15P49685 360 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 PLCB3Q01970 1234 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 DSG1Q02413 1049 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 TAP1Q03518 808 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 BST2Q10589 180 aaKnown RBP10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 PDCLQ13371 301 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 STILQ15468 1287 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 ARHGAP29Q52LW3 1261 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 C10orf76Q5T2E6 689 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 SDHAF4Q5VUM1 108 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 SMYD5Q6GMV2 418 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 PHF13Q86YI8 300 aaPredicted RBP10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 SPATA2LQ8IUW3 424 aaPredicted RBP10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 ZMIZ2Q8NF64 920 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 SLC35F5Q8WV83 523 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 PIK3R5Q8WYR1 880 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 NDRG1Q92597 394 aaKnown RBP10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 DNAI2Q9GZS0 605 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 CRISPLD1Q9H336 500 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 MTRRQ9UBK8 725 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 CEP83Q9Y592 693 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 PCDHA11Q9Y5I1 949 aa10.29□□□□□ -0.76
SNRNP40-201ENST00000263694 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 WDR27A2RRH5 827 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 ANKRD62A6NC57 917 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 OR6C75A6NL08 312 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 E5RJQ4 531 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 GOLGA8SH3BPF8 625 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 GRM6O15303 877 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 MOCS3O95396 460 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 URODP06132 367 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 TMEM253P0C7T8 217 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms