RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 ASB3Q9Y575 518 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 NOP56O00567 594 aaKnown RBP23.72■■□□□ 1.39
MCF2L-201ENST00000261963 ACKR2O00590 384 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 B4GALT4O60513 344 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 TJP3O95049 919 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 ITGBL1O95965 494 aaPredicted RBP23.72■■□□□ 1.39
MCF2L-201ENST00000261963 ZSCAN5DPP0CG00 497 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 KLC1Q07866 573 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 TSNAXIP1Q2TAA8 658 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 TMEM63BQ5T3F8 832 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 ZFYVE27Q5T4F4 411 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 ATF7IP2Q5U623 682 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 DENND1BQ6P3S1 775 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 ZCCHC9Q8N567 271 aaKnown RBP23.72■■□□□ 1.39
MCF2L-201ENST00000261963 OTUD5Q96G74 571 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 SYT15Q9BQS2 421 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 POLIQ9UNA4 740 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 OTOFQ9HC10 1997 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 hCG_1818297A0A087WSY0 165 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 ALDH3A1P30838 453 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 MTFR1Q15390 333 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 TMEM192Q8IY95 271 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 NIPA2Q8N8Q9 360 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 COPS5Q92905 334 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 NLRP4Q96MN2 994 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 LGALS13Q9UHV8 139 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 ACADSP16219 412 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 PTPN7P35236 360 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 PTPN20Q4JDL3 420 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 EAPPQ56P03 285 aaPredicted RBP23.71■■□□□ 1.39
MCF2L-201ENST00000261963 TMEM154Q6P9G4 183 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 APBB1IPQ7Z5R6 666 aaPredicted RBP23.71■■□□□ 1.39
MCF2L-201ENST00000261963 VSIG1Q86XK7 387 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 FBXO16Q8IX29 292 aaPredicted RBP23.71■■□□□ 1.39
MCF2L-201ENST00000261963 TMEM130Q8N3G9 435 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 ALLCQ8N6M5 410 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 MAGEB18Q96M61 343 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 SPATA33Q96N06 139 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 NUDCD1Q96RS6 583 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 RBM15Q96T37 977 aaKnown RBP eCLIP23.71■■□□□ 1.398e-6■■■■■ 30.1
MCF2L-201ENST00000261963 MINDY3Q9H8M7 445 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 TJP2Q9UDY2 1190 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 CYTH4Q9UIA0 394 aa23.71■■□□□ 1.39
MCF2L-201ENST00000261963 GH1P01241 217 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 ETS1P14921 441 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 MPP2Q14168 576 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 PIGHQ14442 188 aaPredicted RBP23.7■■□□□ 1.38
MCF2L-201ENST00000261963 SETDB1Q15047 1291 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 Q3C1V9 767 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 MTHFD1LQ6UB35 978 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.7■■□□□ 1.38
MCF2L-201ENST00000261963 CLMNQ96JQ2 1002 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 ZNF148Q9UQR1 794 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 C2CD2Q9Y426 696 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 INO80B-WBP1J3KQ70 363 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 DNALI1O14645 258 aaPredicted RBP23.7■■□□□ 1.38
MCF2L-201ENST00000261963 BRAFP15056 766 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 CDKN2BP42772 138 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 RAP1GAPP47736 663 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 TAP1Q03518 808 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 OASLQ15646 514 aaKnown RBP23.7■■□□□ 1.38
MCF2L-201ENST00000261963 CCDC62Q6P9F0 684 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 ENDOVQ8N8Q3 282 aaKnown RBP23.7■■□□□ 1.38
MCF2L-201ENST00000261963 INO80BQ9C086 356 aaPredicted RBP23.7■■□□□ 1.38
MCF2L-201ENST00000261963 MYLK2Q9H1R3 596 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 EURLQ9NYK6 297 aa23.7■■□□□ 1.38
MCF2L-201ENST00000261963 NXF1Q9UBU9 619 aaKnown RBP23.7■■□□□ 1.38
MCF2L-201ENST00000261963 TNNC2P02585 160 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 MAGEA4P43358 317 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 CLCN3P51790 818 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 MBTD1Q05BQ5 628 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 EXOC8Q8IYI6 725 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 FAM13CQ8NE31 585 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 CDT1Q9H211 546 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 RBPJLQ9UBG7 517 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 SIX4Q9UIU6 781 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 DNAJC25-GNG10A0A024R161 153 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 SLC25A27O95847 323 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 IQCF3P0C7M6 154 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 CXCL8P10145 99 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 TFDP3Q5H9I0 405 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 ARHGEF18Q6ZSZ5 1173 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 DNAJC9Q8WXX5 260 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 HAUS1Q96CS2 278 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 ANKRD36BP1Q96IX9 119 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 TMEM237Q96Q45 408 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 FOXP3Q9BZS1 431 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 PIDD1Q9HB75 910 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 NAALADL1Q9UQQ1 740 aa23.69■■□□□ 1.38
MCF2L-201ENST00000261963 C3orf70A6NLC5 250 aaPredicted RBP23.68■■□□□ 1.38
MCF2L-201ENST00000261963 RFC1P35251 1148 aaPredicted RBP23.68■■□□□ 1.38
MCF2L-201ENST00000261963 ARSEP51690 589 aa23.68■■□□□ 1.38
MCF2L-201ENST00000261963 VCPP55072 806 aaKnown RBP23.68■■□□□ 1.38
MCF2L-201ENST00000261963 ARFGAP1Q8N6T3 406 aa23.68■■□□□ 1.38
MCF2L-201ENST00000261963 INPP5DQ92835 1189 aa23.68■■□□□ 1.38
MCF2L-201ENST00000261963 PITPNM3Q9BZ71 974 aa23.68■■□□□ 1.38
MCF2L-201ENST00000261963 VCXQ9H320 206 aa23.68■■□□□ 1.38
MCF2L-201ENST00000261963 WDR35Q9P2L0 1181 aa23.68■■□□□ 1.38
MCF2L-201ENST00000261963 DRG1Q9Y295 367 aaKnown RBP23.68■■□□□ 1.38
MCF2L-201ENST00000261963 MAP3K13O43283 966 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms