RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 OTOP2Q7RTS6 562 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PID1Q7Z2X4 250 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PALB2Q86YC2 1186 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 LCORLQ8N3X6 602 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 ATP11CQ8NB49 1132 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 LINC00116Q8NCU8 138 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 OR8K1Q8NGG5 319 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 REPS1Q96D71 796 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 CEP95Q96GE4 821 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 NAPGQ99747 312 aaPredicted RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 KIAA1683Q9H0B3 1180 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 USP29Q9HBJ7 922 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 EML4Q9HC35 981 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 CBX8Q9HC52 389 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 HHATLQ9HCP6 504 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 TAB2Q9NYJ8 693 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 MPP6Q9NZW5 540 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 NOX1Q9Y5S8 564 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PNPLA6Q8IY17 1366 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 ROBO2Q9HCK4 1378 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 A0A1W2PQ67 120 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 OR6C75A6NL08 312 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 EEF2KO00418 725 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 IGHEP01854 428 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 IFNA16P05015 189 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 FGFR1P11362 822 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PABPC1P11940 636 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 BMP4P12644 408 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 GNA15P30679 374 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 DSG3P32926 999 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 RFC1P35251 1148 aaPredicted RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 ALDH18A1P54886 795 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 ACTR2P61160 394 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 SNRPD1P62314 119 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 ITGA7Q13683 1181 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 ITGA9Q13797 1035 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PSMD5Q16401 504 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 ZRANB3Q5FWF4 1079 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 RARS2Q5T160 578 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 PDSS1Q5T2R2 415 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PLA2G4FQ68DD2 849 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 CENPUQ71F23 418 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 LINC00523Q86TU6 105 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 DEPDC4Q8N2C3 294 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 TMEM86AQ8N2M4 240 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 IL22RA1Q8N6P7 574 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 MTMR14Q8NCE2 650 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 UBE2E3Q969T4 207 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 FEM1CQ96JP0 617 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 SERPINI1Q99574 410 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 SH3GL3Q99963 347 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 USB1Q9BQ65 265 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 PRRG3Q9BZD7 231 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 TRIM31Q9BZY9 425 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 MTMR12Q9C0I1 747 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PABPC3Q9H361 631 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 ACTR5Q9H9F9 607 aaPredicted RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 TRMT1Q9NXH9 659 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 GCNT4Q9P109 453 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 KRIT1O00522 736 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 VPS26AO75436 327 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 CRTAMO95727 393 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 MT-ND3P03897 115 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PGK2P07205 417 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 GFAPP14136 432 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PDGFRAP16234 1089 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 HDCP19113 662 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PIK3R1P27986 724 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 ARL4CP56559 192 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 IL2P60568 153 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 DYNLT1P63172 113 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PTPN11Q06124 597 aaPredicted RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 ZNF394Q53GI3 561 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 TEDDM1Q5T9Z0 273 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 SPRYD7Q5W111 196 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 MRNIPQ6NTE8 343 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 USP45Q70EL2 814 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 C11orf96Q7Z7L8 435 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 MIB1Q86YT6 1006 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 RNF135Q8IUD6 432 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 TRIM59Q8IWR1 403 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 ZNF614Q8N883 585 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 MOSPD2Q8NHP6 518 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 MGARPQ8TDB4 240 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 BAP1Q92560 729 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 ARHGEF2Q92974 986 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 TIFAQ96CG3 184 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PAWRQ96IZ0 340 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 S100A13Q99584 98 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 POLR3CQ9BUI4 534 aaPredicted RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 EPN3Q9H201 632 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 LZTFL1Q9NQ48 299 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 TMEM161AQ9NX61 479 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 SRRDQ9UH36 339 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 FBXL5Q9UKA1 691 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 CDC14AQ9UNH5 594 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 ARHGEF12Q9NZN5 1544 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 CPDO75976 1380 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 F8W810 466 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 RGS16O15492 202 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms