RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 SLC4A5Q9BY07 1137 aa19.62■□□□□ 0.73
SNX17-201ENST00000233575 TMEM30AQ9NV96 361 aa19.62■□□□□ 0.73
SNX17-201ENST00000233575 TMEM191CA6NGB0 347 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 MYO1FO00160 1098 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 PDE2AO00408 941 aaPredicted RBP19.61■□□□□ 0.73
SNX17-201ENST00000233575 SLU7O95391 586 aaKnown RBP19.61■□□□□ 0.73
SNX17-201ENST00000233575 PCSK1P29120 753 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 CACNA2D1P54289 1103 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 ZNF252P-AS1Q0IIN9 211 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 INTS6LQ5JSJ4 861 aaKnown RBP19.61■□□□□ 0.73
SNX17-201ENST00000233575 FAM183BPQ6ZVS7 135 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 CREG2Q8IUH2 290 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 MYCBPAPQ8TBZ2 947 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 KRT35Q92764 455 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 PKMYT1Q99640 499 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 MED10Q9BTT4 135 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 DNAI2Q9GZS0 605 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 CWH43Q9H720 699 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 IL23AQ9NPF7 189 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 KCNK3O14649 394 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 DDX3YO15523 660 aaKnown RBP19.61■□□□□ 0.73
SNX17-201ENST00000233575 AMHP03971 560 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 SETSIPP0DME0 302 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 PRLRP16471 622 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 FAM171A1Q5VUB5 890 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 CLEC20AQ6ZU45 233 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 C7orf61Q8IZ16 206 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 SPATA18Q8TC71 538 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 IPO4Q8TEX9 1081 aaKnown RBP19.61■□□□□ 0.73
SNX17-201ENST00000233575 MYLPFQ96A32 169 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 MS4A14Q96JA4 679 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 CALR3Q96L12 384 aaKnown RBP19.61■□□□□ 0.73
SNX17-201ENST00000233575 DUSP16Q9BY84 665 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 METTL5Q9NRN9 209 aaKnown RBP19.61■□□□□ 0.73
SNX17-201ENST00000233575 KRT82Q9NSB4 513 aa19.61■□□□□ 0.73
SNX17-201ENST00000233575 RNF216Q9NWF9 866 aaPredicted RBP19.61■□□□□ 0.73
SNX17-201ENST00000233575 OR4Q2P0C623 313 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 TCP1P17987 556 aaKnown RBP19.6■□□□□ 0.73
SNX17-201ENST00000233575 RFC1P35251 1148 aaPredicted RBP19.6■□□□□ 0.73
SNX17-201ENST00000233575 EPHB4P54760 987 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 GSCP56915 257 aaPredicted RBP19.6■□□□□ 0.73
SNX17-201ENST00000233575 PLCB3Q01970 1234 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 ZNF268Q14587 947 aaPredicted RBP19.6■□□□□ 0.73
SNX17-201ENST00000233575 FAM171BQ6P995 826 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 DCUN1D2Q6PH85 259 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 TMEM110Q86TL2 294 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 FAM35AQ86V20 835 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 CEP57Q86XR8 500 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 SCUBE3Q8IX30 993 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 EMC1Q8N766 993 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 MSANTD4Q8NCY6 345 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 ALG3Q92685 438 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 MCRS1Q96EZ8 462 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 TMEM175Q9BSA9 504 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 SELENOOQ9BVL4 669 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 COLEC11Q9BWP8 271 aa19.6■□□□□ 0.73
SNX17-201ENST00000233575 RC3H2Q9HBD1 1191 aaKnown RBP19.6■□□□□ 0.73
SNX17-201ENST00000233575 PAPSS1O43252 624 aaPredicted RBP19.59■□□□□ 0.73
SNX17-201ENST00000233575 KRT3P12035 628 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 NPR3P17342 541 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 TAF5Q15542 800 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 WHAMMP3Q1A5X7 153 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 DCAF12L1Q5VU92 463 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 OR6B2Q6IFH4 312 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 FUT10Q6P4F1 479 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 PIGZQ86VD9 579 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 CLEC4CQ8WTT0 213 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 CD101Q93033 1021 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 ZNF689Q96CS4 500 aaPredicted RBP19.59■□□□□ 0.73
SNX17-201ENST00000233575 KCNK16Q96T55 309 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 MIS12Q9H081 205 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.59■□□□□ 0.73
SNX17-201ENST00000233575 V9GYY5 206 aaPredicted RBP19.59■□□□□ 0.73
SNX17-201ENST00000233575 NLRC5Q86WI3 1866 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 SIGLEC16A6NMB1 481 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 TRAPPC3O43617 180 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 SPOPO43791 374 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 PROSCO94903 275 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 LCP1P13796 627 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 SYN1P17600 705 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 PLA2G4AP47712 749 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 MAP3K7CLP57077 242 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 TUBB2AQ13885 445 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 NAA30Q147X3 362 aaPredicted RBP19.59■□□□□ 0.73
SNX17-201ENST00000233575 VARS2Q5ST30 1063 aaKnown RBP19.59■□□□□ 0.73
SNX17-201ENST00000233575 FAM102AQ5T9C2 384 aaPredicted RBP19.59■□□□□ 0.73
SNX17-201ENST00000233575 TAS1R1Q7RTX1 841 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 THEM5Q8N1Q8 247 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 STK32AQ8WU08 396 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 TSC1Q92574 1164 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 SMOQ99835 787 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 TUBB2BQ9BVA1 445 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 WDR35Q9P2L0 1181 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 PRKAG2Q9UGJ0 569 aa19.59■□□□□ 0.73
SNX17-201ENST00000233575 ARHGEF37A1IGU5 675 aa19.58■□□□□ 0.73
SNX17-201ENST00000233575 XPO1O14980 1071 aaKnown RBP19.58■□□□□ 0.73
SNX17-201ENST00000233575 GRAP2O75791 330 aa19.58■□□□□ 0.73
SNX17-201ENST00000233575 OAZ2O95190 189 aa19.58■□□□□ 0.73
SNX17-201ENST00000233575 OLFML1Q6UWY5 402 aa19.58■□□□□ 0.73
SNX17-201ENST00000233575 ZNF365Q70YC5 407 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms