RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Fam118bQ8C569 351 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 E2f4Q8R0K9 410 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 AdigQ8R400 80 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 MtrexQ9CZU3 1040 aaKnown RBP10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Trim10Q9WUH5 489 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mroh2aD3Z750 1679 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ankrd63A2ARS0 390 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pbx1P41778 430 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Krt6aP50446 553 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rps6P62754 249 aaKnown RBP10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gga3Q8BMI3 718 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 CerkQ8K4Q7 531 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 DaglbQ91WC9 669 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pcdhb1Q91Y08 818 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Slfn14V9GXG1 899 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Olfr1123A2AT85 323 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 S100zB9EJL3 99 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Slc27a2O35488 620 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Got1P05201 413 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 rp9P97762 213 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rbbp7Q60973 425 aaKnown RBP10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zcwpw1Q6IR42 630 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Lsm8Q6ZWM4 96 aaKnown RBP10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Kcnq3Q8K3F6 873 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ccdc77Q9CZH8 489 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gprc5dQ9JIL6 344 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tsc22d3Q9Z2S7 137 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Scgb2b12S4R2L0 112 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm5861F6VCN9 180 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 4933402N22RikF7D1B3 190 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Kcna1P16388 495 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 GsapQ3TCV3 858 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ccnt2Q7TQK0 723 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Q8BGC1 442 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Sugp1Q8CH02 643 aaKnown RBP10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 TwnkQ8CIW5 685 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Alg9Q8VDI9 611 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cdyl2Q9D5D8 503 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm10406A6NAS4 205 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3373A6NAS7 205 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Lilra5D3Z7A9 295 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3252E9PUT9 216 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3002E9PW72 216 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3298E9PW80 205 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3468E9QAJ8 216 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3667K7N757 205 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3264L7N2C5 238 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 C1dO35473 141 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Serpina3kP07759 418 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Serpinh1P19324 417 aaKnown RBP10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Hdgfl2Q3UMU9 669 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3558Q5FWC9 205 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Klrb1fQ8VD98 217 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 LactbQ9EP89 551 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Racgap1Q9WVM1 628 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Igsf9bE9PZ19 1328 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm5689F6Y2A6 97 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Klf6O08584 283 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Serpina6Q06770 397 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Slc38a7Q8BWH0 463 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 AslQ91YI0 464 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 CalcbQ99MP3 130 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ppp1r3aQ99MR9 1089 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 NenfQ9CQ45 171 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rasgrp2Q9QUG9 608 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Acot3Q9QYR7 432 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Kiaa1210E9Q0C6 1637 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cdr2lA2A6T1 465 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mocs3A2BDX3 460 aaKnown RBP10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm10477F6SW83 55 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 MafgO54790 162 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Epas1P97481 874 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gsdmc2Q2KHK6 480 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 9930111J21Rik1Q5SVP0 844 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 PhgdhQ61753 533 aaKnown RBP10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Nlrp9cQ66X01 1004 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Acot5Q6Q2Z6 421 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Elmo2Q8BHL5 732 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Prdm8Q8BZ97 687 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ano4Q8C5H1 955 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pds5aQ6A026 1332 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 ClockO08785 855 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Aco1P28271 889 aaKnown RBP10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Fgfr4Q03142 799 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ddr2Q62371 854 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Fnip1Q68FD7 1165 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Armc6Q8BNU0 468 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mrgprx1Q8CIP3 322 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Slc5a5Q99PN0 618 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Bbs2Q9CWF6 721 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Dpp7Q9ET22 506 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 NfkbiaQ9Z1E3 314 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ifit3bE9PV48 403 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mroh4G3X8W1 983 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Snap25P60879 206 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 SpdyaQ5IBH7 310 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ccdc137Q8R0K4 290 aaKnown RBP10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 4930550L24RikQ99PA7 320 aa10.51□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Znf608Q56A10 1511 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tbc1d16A2ABG4 766 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms