RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 DCLRE1AQ6PJP8 1040 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 DSTYKQ6XUX3 929 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 SYDE1Q6ZW31 735 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-215ENST00000641371 TMEM110Q86TL2 294 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 DNAAF5Q86Y56 855 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 FAM126BQ8IXS8 530 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 RCOR2Q8IZ40 523 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 WDTC1Q8N5D0 677 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 ANKLE1Q8NAG6 615 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 B3GALNT2Q8NCR0 500 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 SENP8Q96LD8 212 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 TOX2Q96NM4 488 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 TWNKQ96RR1 684 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 HNRNPABQ99729 332 aaKnown RBP10.26□□□□□ -0.77
PHGDH-215ENST00000641371 RHOXF2Q9BQY4 288 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 MRPL45Q9BRJ2 306 aaKnown RBP10.26□□□□□ -0.77
PHGDH-215ENST00000641371 SLC4A5Q9BY07 1137 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 FRMD8P1Q9BZ68 369 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-215ENST00000641371 UBXN6Q9BZV1 441 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 RBM12Q9NTZ6 932 aaKnown RBP10.26□□□□□ -0.77
PHGDH-215ENST00000641371 ASNSD1Q9NWL6 643 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 TMEM161AQ9NX61 479 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 CDH9Q9ULB4 789 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 L1RE1Q9UN81 338 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 EFR3BQ9Y2G0 817 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 TANC1Q9C0D5 1861 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 DCDC2CA8MYV0 355 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 DPYSL4O14531 572 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 XPO1O14980 1071 aaKnown RBP10.25□□□□□ -0.77
PHGDH-215ENST00000641371 TRAPPC3O43617 180 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 PHF2O75151 1096 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 FBXO21O94952 628 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 ZRANB2O95218 330 aaKnown RBP eCLIP10.25□□□□□ -0.77
PHGDH-215ENST00000641371 GLI1P08151 1106 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 CCL5P13501 91 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 PSMA2P25787 234 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 RFC2P35250 354 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 PCK1P35558 622 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 PLA2G4AP47712 749 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 RPL34P49207 117 aaKnown RBP10.25□□□□□ -0.77
PHGDH-215ENST00000641371 SCNN1GP51170 649 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 CLCN6P51797 869 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 PLCB3Q01970 1234 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 SOX4Q06945 474 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-215ENST00000641371 NNTQ13423 1086 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 CYP1B1Q16678 543 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 UPP1Q16831 310 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 PPP1R26Q5T8A7 1209 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-215ENST00000641371 TRAF7Q6Q0C0 670 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 ANKRD33Q7Z3H0 272 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 ACOT1Q86TX2 421 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 VSIG1Q86XK7 387 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 XYLT1Q86Y38 959 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 SLC13A5Q86YT5 568 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-215ENST00000641371 THEM5Q8N1Q8 247 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 C12orf50Q8NA57 414 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-215ENST00000641371 GSTCDQ8NEC7 633 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 GRK7Q8WTQ7 553 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 SLC35F5Q8WV83 523 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 KBTBD7Q8WVZ9 684 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 MS4A14Q96JA4 679 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 ZFP42Q96MM3 310 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 MCEEQ96PE7 176 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 CPXM1Q96SM3 734 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 CNPY3Q9BT09 278 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 TRIM62Q9BVG3 475 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 OXCT2Q9BYC2 517 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-215ENST00000641371 MRPL9Q9BYD2 267 aaKnown RBP10.25□□□□□ -0.77
PHGDH-215ENST00000641371 RNF208Q9H0X6 261 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 UNC93B1Q9H1C4 597 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 TRPV6Q9H1D0 765 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 GOLPH3Q9H4A6 298 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 WBP1LQ9NX94 342 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 HMGXB4Q9UGU5 601 aa10.25□□□□□ -0.77
PHGDH-215ENST00000641371 M0QZQ0 153 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 PPEF2O14830 753 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 FSCN2O14926 492 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 CFHP08603 1231 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 ZNF143P52747 638 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-215ENST00000641371 EPHB4P54760 987 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 LMNB2Q03252 620 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 NAA30Q147X3 362 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-215ENST00000641371 PLEKHG4Q58EX7 1191 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 NOMO2Q5JPE7 1267 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 EFHC1Q5JVL4 640 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 FAM102AQ5T9C2 384 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-215ENST00000641371 SCARA3Q6AZY7 606 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 CC2D1AQ6P1N0 951 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-215ENST00000641371 EMBQ6PCB8 327 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 HDXQ7Z353 690 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 ABI1Q8IZP0 508 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 SH3TC2Q8TF17 1288 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 KCTD13Q8WZ19 329 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 TSC1Q92574 1164 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 ALG3Q92685 438 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 SUSD3Q96L08 255 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 DEFB118Q96PH6 123 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 FAM193BQ96PV7 902 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-215ENST00000641371 TBCBQ99426 244 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 KRT12Q99456 494 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms