RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 GSG1L2A8MUP6 293 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 MT-CO1P00395 513 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 MYL2P10916 166 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 ZSCAN18Q8TBC5 510 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 SCFD1Q8WVM8 642 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 PCDHA10Q9Y5I2 948 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 GNG14A0A1W2PPG7 69 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 PYGMP11217 842 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 RARS2Q5T160 578 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 CHMP2BQ9UQN3 213 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 SRP72O76094 671 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 ACTR2P61160 394 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 INPP5AQ14642 412 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 CLEC16AQ2KHT3 1053 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 DET1Q7L5Y6 550 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 EME1Q96AY2 570 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 MSH4O15457 936 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 EIF2S1P05198 315 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 LRRC8BQ6P9F7 803 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 GPRASP2Q96D09 838 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 FAM84BQ96KN1 310 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 TRIM51Q9BSJ1 452 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 IMPAD1Q9NX62 359 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 RNF112Q9ULX5 631 aa17.66■□□□□ 0.42
CACNA1A-253ENST00000637927 CKBP12277 381 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 RHOT1Q8IXI2 618 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 MYOCQ99972 504 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 NPC1L1Q9UHC9 1359 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 ASB14A6NK59 587 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 CSDE1O75534 798 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 CEBPGP53567 150 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 DGKDQ16760 1214 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 DNAJC1Q96KC8 554 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 CHST12Q9NRB3 414 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 HACL1Q9UJ83 578 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 CDYLQ9Y232 598 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 METTL5Q9NRN9 209 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 BFARQ9NZS9 450 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 MAFFQ9ULX9 164 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 SYNMO15061 1565 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 C3orf70A6NLC5 250 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 MRPS35P82673 323 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 HIC1Q14526 733 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 GJB7Q6PEY0 223 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 EPHX4Q8IUS5 362 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 EXOC4Q96A65 974 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 FAM20AQ96MK3 541 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 TCEA3O75764 348 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 TFE3P19532 575 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 SLC35G2Q8TBE7 412 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 ECSITQ9BQ95 431 aa17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 MRPS26Q9BYN8 205 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-253ENST00000637927 VSNL1P62760 191 aa17.64■□□□□ 0.42
CACNA1A-253ENST00000637927 MROH9Q5TGP6 573 aa17.64■□□□□ 0.42
CACNA1A-253ENST00000637927 PIH1D1Q9NWS0 290 aaKnown RBP17.64■□□□□ 0.42
CACNA1A-253ENST00000637927 NAA30Q147X3 362 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 ZFYVE28Q9HCC9 887 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 PQBP1O60828 265 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 RAP1GAPP47736 663 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 TLK2Q86UE8 772 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 BBS7Q8IWZ6 715 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 COL26A1Q96A83 441 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 EXOC2Q96KP1 924 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 ZNF560Q96MR9 790 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 KLHL31Q9H511 634 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 RABGAP1LQ5R372 815 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 DDI1Q8WTU0 396 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 TRIM62Q9BVG3 475 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 MRPL1Q9BYD6 325 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 DIS3Q9Y2L1 958 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 TTC26A0AVF1 554 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 FOXO4P98177 505 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 KYNUQ16719 465 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 C2CD6Q53TS8 623 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 C16orf59Q7L2K0 433 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 TRMT11Q7Z4G4 463 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 WNT8AQ9H1J5 351 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 MTIF3Q9H2K0 278 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 OSBPL3Q9H4L5 887 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 NOP53Q9NZM5 478 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 EFR3BQ9Y2G0 817 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 HSD3B2P26439 372 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 SLC13A5Q86YT5 568 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 KIF2BQ8N4N8 673 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 SERAC1Q96JX3 654 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 GJD4Q96KN9 370 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 UBP1Q9NZI7 540 aa17.64■□□□□ 0.41
CACNA1A-253ENST00000637927 DYRK3O43781 588 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 HIST2H2ACQ16777 129 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 HIST2H2AA3Q6FI13 130 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 ZSWIM2Q8NEG5 633 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 CNDP1Q96KN2 507 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 SENP6Q9GZR1 1112 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 SOHLH2Q9NX45 425 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 SH3BGRP55822 239 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 GNASQ5JWF2 1037 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 DENND5BQ6ZUT9 1274 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 PIGKQ92643 395 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 SLC4A9Q96Q91 983 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 CARD9Q9H257 536 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms