RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 MGRN1O60291 552 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 GRIN3BO60391 1043 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 MT-ND3P03897 115 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 ATP4AP20648 1035 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 RFC5P40937 340 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 KCTD2Q14681 263 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 GLRA4Q5JXX5 417 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 MFSD5Q6N075 450 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 ZNF354CQ86Y25 554 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 PPFIBP2Q8ND30 876 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 CCNYQ8ND76 341 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 EXD1Q8NHP7 514 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 AGR3Q8TD06 166 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 STMN2Q93045 179 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 MAGEB18Q96M61 343 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 KIAA1683Q9H0B3 1180 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 AVENQ9NQS1 362 aaPredicted RBP15.17■□□□□ 0.02
PTBP1-221ENST00000635647 TXNDC16Q9P2K2 825 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 SYNPO2Q9UMS6 1093 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 COQ4Q9Y3A0 265 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 DPPA5A6NC42 116 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 LYPLA2O95372 231 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 PYGLP06737 847 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 FDX1P10109 184 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 TBXAS1P24557 533 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 POLR2BP30876 1174 aaKnown RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 SCARA3Q6AZY7 606 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 TRIM72Q6ZMU5 477 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 ZNF677Q86XU0 584 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 CCDC110Q8TBZ0 833 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 ABTB1Q969K4 478 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 CDHR1Q96JP9 859 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 RPF1Q9H9Y2 349 aaKnown RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 MCF2LO15068 1137 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 CBX6O95503 412 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 LDHAP00338 332 aaKnown RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 FOXN2P32314 431 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 PHBP35232 272 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 TFDP1Q14186 410 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 EFTUD2Q15029 972 aaKnown RBP eCLIP15.16■□□□□ 0.025e-8■■■□□ 17.3
PTBP1-221ENST00000635647 SPOCD1Q6ZMY3 1216 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 CEP128Q6ZU80 1094 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 APBB1IPQ7Z5R6 666 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 FAM83AQ86UY5 434 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 PDIK1LQ8N165 341 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 GPRASP2Q96D09 838 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 SPATA33Q96N06 139 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 ADPGKQ9BRR6 497 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 SCOCQ9UIL1 159 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 POLIQ9UNA4 740 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 BHMG1C9JSJ3 638 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 ONECUT3O60422 494 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 PFDN1O60925 122 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 PRKCBP05771 671 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 CALB1P05937 261 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 GSTA1P08263 222 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 TROVE2P10155 538 aaKnown RBP eCLIP15.16■□□□□ 0.022e-6■■□□□ 11.7
PTBP1-221ENST00000635647 TCF7P36402 384 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 OTUD4Q01804 1114 aaKnown RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 PSMD6Q15008 389 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 DUOXA2Q1HG44 320 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 MON1BQ7L1V2 547 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 ANKS1BQ7Z6G8 1248 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 C12orf50Q8NA57 414 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 ACTL9Q8TC94 416 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 FAF2Q96CS3 445 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 RAB3IPQ96QF0 476 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-221ENST00000635647 CYTH2Q99418 400 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 MYLK2Q9H1R3 596 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 CISHQ9NSE2 258 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 TXLNGQ9NUQ3 528 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 C2CD2Q9Y426 696 aa15.16■□□□□ 0.02
PTBP1-221ENST00000635647 GLRA2P23416 452 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 BACE1P56817 501 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 FAM160B1Q5W0V3 765 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 SAMD3Q8N6K7 520 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 ST6GALNAC4Q9H4F1 302 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 C17orf75Q9HAS0 396 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 RXFP1Q9HBX9 757 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 OATP04181 439 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 PDGFRBP09619 1106 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 UBTFL6P0CB48 400 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-221ENST00000635647 ZCCHC18P0CG32 403 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 GAD2Q05329 585 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 COPS5Q92905 334 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 ZNF541Q9H0D2 1346 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 TXNDC9O14530 226 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 DNALI1O14645 258 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-221ENST00000635647 LIASO43766 372 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 ZC3H11AO75152 810 aaKnown RBP eCLIP15.15■□□□□ 0.029e-7■■□□□ 14.3
PTBP1-221ENST00000635647 VNN1O95497 513 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 APRTP07741 180 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 SUPT20HL2P0C7V6 817 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 ARL4CP56559 192 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 SUPT20HL1Q3ZLR7 823 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 MOB2Q70IA6 237 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 ECHDC2Q86YB7 292 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 OR6B3Q8NGW1 331 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 FGD4Q96M96 766 aa15.15■□□□□ 0.02
PTBP1-221ENST00000635647 TMEM109Q9BVC6 243 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms