RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 EVPLQ92817 2033 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 PIK3R2O00459 728 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 BANF1O75531 89 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 ITGAVP06756 1048 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 PTPN7P35236 360 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 SCTRP47872 440 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 OTUD4Q01804 1114 aaKnown RBP12.59□□□□□ -0.39
TP53-227ENST00000622645 GAD2Q05329 585 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 PTPN11Q06124 597 aaPredicted RBP12.59□□□□□ -0.39
TP53-227ENST00000622645 ARHGAP1Q07960 439 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 TMED2Q15363 201 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 AMHR2Q16671 573 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 SLC10A6Q3KNW5 377 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 ICE2Q659A1 982 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 ARMCX2Q7L311 632 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 POLNQ7Z5Q5 900 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 MROH8Q9H579 483 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 PRMT7Q9NVM4 692 aaPredicted RBP12.59□□□□□ -0.39
TP53-227ENST00000622645 EURLQ9NYK6 297 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 LGALS13Q9UHV8 139 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 AKT3Q9Y243 479 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 MGAMO43451 1857 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 EXOC1LA0A1B0GW35 172 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 RASA4BC9J798 803 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 RASA4O43374 803 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 MICAL2O94851 1124 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 LGALS2P05162 132 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 OSBPP22059 807 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 GCAP28676 217 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 PHKA2P46019 1235 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 PPIL2Q13356 520 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 MTM1Q13496 603 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 RNASEH2BQ5TBB1 312 aaKnown RBP12.59□□□□□ -0.39
TP53-227ENST00000622645 NUGGCQ68CJ6 796 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 ZBED8Q8IZ13 594 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 UBA3Q8TBC4 463 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 MRRFQ96E11 262 aaKnown RBP12.59□□□□□ -0.39
TP53-227ENST00000622645 TMEM176AQ96HP8 235 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 ADAM33Q9BZ11 813 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 PDZD7Q9H5P4 517 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 ACTR5Q9H9F9 607 aaPredicted RBP12.59□□□□□ -0.39
TP53-227ENST00000622645 GGT7Q9UJ14 662 aa12.59□□□□□ -0.39
TP53-227ENST00000622645 POC1B-GALNT4F8VUJ3 575 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 M0QYV0 167 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 SNX3O60493 162 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 CILPO75339 1184 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 ZNF286BP0CG31 522 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 ARF4P18085 180 aaPredicted RBP12.58□□□□□ -0.4
TP53-227ENST00000622645 KDELR1P24390 212 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 LACTB2Q53H82 288 aaPredicted RBP12.58□□□□□ -0.4
TP53-227ENST00000622645 FAM182AQ5T1J6 154 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 MAML1Q92585 1016 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 HEXIM2Q96MH2 286 aaKnown RBP12.58□□□□□ -0.4
TP53-227ENST00000622645 CFAP57Q96MR6 1250 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 FOXP3Q9BZS1 431 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 KRT7P08729 469 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 MYO1EQ12965 1108 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 ITIH4Q14624 930 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 MORF4L2Q15014 288 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 HADHQ16836 314 aaKnown RBP12.58□□□□□ -0.4
TP53-227ENST00000622645 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
TP53-227ENST00000622645 CCDC125Q86Z20 511 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 ANKMY2Q8IV38 441 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 AFG1LQ8WV93 481 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 HSPH1Q92598 858 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 HPDLQ96IR7 371 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 NFKBIZQ9BYH8 718 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 VPS37BQ9H9H4 285 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 PCDH9Q9HC56 1237 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 AGAP1Q9UPQ3 857 aa12.58□□□□□ -0.4
TP53-227ENST00000622645 ABHD2P08910 425 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 MCF2P10911 925 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 MIPP30301 263 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 GJA5P36382 358 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 GPD2P43304 727 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 NRLP54845 237 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 PDIA2Q13087 525 aaKnown RBP12.57□□□□□ -0.4
TP53-227ENST00000622645 ZKSCAN8Q15776 578 aaPredicted RBP12.57□□□□□ -0.4
TP53-227ENST00000622645 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 ANKRD22Q5VYY1 191 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 ILDR2Q71H61 639 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 FASTKD5Q7L8L6 764 aaKnown RBP12.57□□□□□ -0.4
TP53-227ENST00000622645 KCTD6Q8NC69 237 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 FNIP1Q8TF40 1166 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 CKAP2Q8WWK9 683 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 PRCCQ92733 491 aaPredicted RBP12.57□□□□□ -0.4
TP53-227ENST00000622645 NSRP1Q9H0G5 558 aaKnown RBP12.57□□□□□ -0.4
TP53-227ENST00000622645 RAB6CQ9H0N0 254 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 KIF9Q9HAQ2 790 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.57□□□□□ -0.4
TP53-227ENST00000622645 ANK1P16157 1881 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 ASB14A6NK59 587 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 SPAG7O75391 227 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 PIAS1O75925 651 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 STX2P32856 288 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 ZNF484Q5JVG2 852 aa12.57□□□□□ -0.4
TP53-227ENST00000622645 FAM102AQ5T9C2 384 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms