RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CTNNB1P35222 781 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 CENPCQ03188 943 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 MAPRE1Q15691 268 aaKnown RBP18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 FAM171BQ6P995 826 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 PRSS55Q6UWB4 352 aaPredicted RBP18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 FUKQ8N0W3 1084 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 TXLNBQ8N3L3 684 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 ATRIPQ8WXE1 791 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 MYLPFQ96A32 169 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 PCED1BQ96HM7 432 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 PKMYT1Q99640 499 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 B3GNT5Q9BYG0 378 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 ZNF518BQ9C0D4 1074 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 ZCWPW1Q9H0M4 648 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 ISCUQ9H1K1 167 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 RWDD3Q9Y3V2 267 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 PTPRDP23468 1912 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 PDE4DIPQ5VU43 2346 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 RCCD1A6NED2 376 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 CLDN5O00501 218 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 OR4Q2P0C623 313 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 BMPR1AP36894 532 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 GLUD2P49448 558 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 GALCP54803 685 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 LRRTM3Q86VH5 581 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 TTC30AQ86WT1 665 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 DCP1BQ8IZD4 617 aaKnown RBP18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 WDTC1Q8N5D0 677 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 ANKRD52Q8NB46 1076 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 KLHL23Q8NBE8 558 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 SECISBP2LQ93073 1101 aaKnown RBP18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 PPP1R13BQ96KQ4 1090 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 CHST7Q9NS84 486 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 C2CD2LO14523 706 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 ABCB4P21439 1286 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 BCAT1P54687 386 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 PSMD5Q16401 504 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 SLC39A12Q504Y0 691 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 PKDCCQ504Y2 493 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 PPP1R2P3Q6NXS1 205 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 REXO1L1PQ8IX06 675 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 VPS52Q8N1B4 723 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 PIK3R5Q8WYR1 880 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 LACRTQ9GZZ8 138 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 LZTFL1Q9NQ48 299 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 TMLHEQ9NVH6 421 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 STK39Q9UEW8 545 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 INTUQ9ULD6 942 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 PCDHA11Q9Y5I1 949 aa18.86■□□□□ 0.61
PTCHD3-202ENST00000622555 ANKRD62A6NC57 917 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 ATP8B3O60423 1300 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 URODP06132 367 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 CA3P07451 260 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 GPD2P43304 727 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 ARPP19P56211 112 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 PLCB3Q01970 1234 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 DSG1Q02413 1049 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 BST2Q10589 180 aaKnown RBP18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 KIF5AQ12840 1032 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 ARHGAP29Q52LW3 1261 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 PAQR9Q6ZVX9 377 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 FAM35AQ86V20 835 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 PHF13Q86YI8 300 aaPredicted RBP18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 NOX5Q96PH1 765 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 C11orf70Q9BRQ4 267 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 C17orf80Q9BSJ5 609 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 OXCT2Q9BYC2 517 aaPredicted RBP18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 KRT82Q9NSB4 513 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 CYTH4Q9UIA0 394 aa18.85■□□□□ 0.61
PTCHD3-202ENST00000622555 TBC1D4O60343 1298 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 ARHGEF15O94989 841 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 FAM200BP0CF97 657 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 CPB1P15086 417 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 PDE4CQ08493 712 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 C4orf50Q6ZRC1 276 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 MMS22LQ6ZRQ5 1243 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 ERICH1Q86X53 443 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 SPATA2LQ8IUW3 424 aaPredicted RBP18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 MCOLN2Q8IZK6 566 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 CTNNBL1Q8WYA6 563 aaPredicted RBP18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 PLVAPQ9BX97 442 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 DUSP16Q9BY84 665 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 TSGA10Q9BZW7 698 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 THAP2Q9H0W7 228 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 ADAM22Q9P0K1 906 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 MTRRQ9UBK8 725 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 TRIM10Q9UDY6 481 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 MTUS1Q9ULD2 1270 aa18.84■□□□□ 0.61
PTCHD3-202ENST00000622555 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 GOLGA6L9A6NEM1 432 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 PJA2O43164 708 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 TMEM253P0C7T8 217 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 SETSIPP0DME0 302 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 RPL17P18621 184 aaKnown RBP18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 DNAJB2P25686 324 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 ARHGAP25P42331 645 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 SLC8A3P57103 927 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 PDCLQ13371 301 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 C2CD6Q53TS8 623 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms