RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 TTC30AQ86WT1 665 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 C7orf61Q8IZ16 206 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 SYCE1Q8N0S2 351 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 SLC35G2Q8TBE7 412 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 CLP1Q92989 425 aaKnown RBP12.43□□□□□ -0.42
PDPN-211ENST00000617617 ARHGEF26Q96DR7 871 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 HSFY1Q96LI6 401 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 HERC2P3Q9BVR0 1158 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 DUSP16Q9BY84 665 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 ADAM22Q9P0K1 906 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 CYTH4Q9UIA0 394 aa12.43□□□□□ -0.42
PDPN-211ENST00000617617 MTCL1Q9Y4B5 1905 aaKnown RBP12.42□□□□□ -0.42
PDPN-211ENST00000617617 XPO1O14980 1071 aaKnown RBP12.42□□□□□ -0.42
PDPN-211ENST00000617617 TADA2AO75478 443 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 GJB5O95377 273 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 LINC00271P0C7V0 271 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 MAN1A1P33908 653 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 ACADSBP45954 432 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 PDCLQ13371 301 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 FUT10Q6P4F1 479 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 PAQR9Q6ZVX9 377 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 FUKQ8N0W3 1084 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 SLC39A11Q8N1S5 342 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 C3orf20Q8ND61 904 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 C1orf131Q8NDD1 294 aaKnown RBP12.42□□□□□ -0.42
PDPN-211ENST00000617617 KIF18AQ8NI77 898 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 CPA5Q8WXQ8 436 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 MCRS1Q96EZ8 462 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 ABHD8Q96I13 439 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 PDCL3Q9H2J4 239 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 PARVAQ9NVD7 372 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 PUF60Q9UHX1 559 aaKnown RBP12.42□□□□□ -0.42
PDPN-211ENST00000617617 TFR2Q9UP52 801 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 JRKLQ9Y4A0 524 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 ZNF638Q14966 1978 aaKnown RBP12.42□□□□□ -0.42
PDPN-211ENST00000617617 H7C4K7 107 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 M0QYV0 167 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 CES2O00748 559 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 FANCGO15287 622 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 GNG11P61952 73 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
PDPN-211ENST00000617617 PAPD7Q5XG87 772 aaKnown RBP12.42□□□□□ -0.42
PDPN-211ENST00000617617 FNIP1Q8TF40 1166 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 C2orf15Q8WU43 125 aaKnown RBP12.42□□□□□ -0.42
PDPN-211ENST00000617617 FUBP3Q96I24 572 aaKnown RBP eCLIP12.42□□□□□ -0.42
PDPN-211ENST00000617617 IGSF21Q96ID5 467 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 CEP295NLQ96MC4 621 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 WDR24Q96S15 920 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 B3GNT5Q9BYG0 378 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 CHST7Q9NS84 486 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 HESX1Q9UBX0 185 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 BACE2Q9Y5Z0 518 aa12.42□□□□□ -0.42
PDPN-211ENST00000617617 GRID2IPA4D2P6 1211 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 PTPN20Q4JDL3 420 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 ZNF569Q5MCW4 686 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 ERICH1Q86X53 443 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 C12orf29Q8N999 325 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 COLGALT1Q8NBJ5 622 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 ZNF653Q96CK0 615 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 HSFX1Q9UBD0 423 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 CNOT8Q9UFF9 292 aaKnown RBP12.41□□□□□ -0.42
PDPN-211ENST00000617617 MAFFQ9ULX9 164 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 COG5Q9UP83 839 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 CAPN6Q9Y6Q1 641 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 ACRP10323 421 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 PPM1AP35813 382 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 EPHB4P54760 987 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 MAMLD1Q13495 774 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 ANKS3Q6ZW76 656 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 SLC35F6Q8N357 371 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 NIPA2Q8N8Q9 360 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 ZNF558Q96NG5 402 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 MTIF3Q9H2K0 278 aaKnown RBP12.41□□□□□ -0.42
PDPN-211ENST00000617617 ASNSD1Q9NWL6 643 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 INSL6Q9Y581 213 aa12.41□□□□□ -0.42
PDPN-211ENST00000617617 ATG2AQ2TAZ0 1938 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 TMCO5BA8MYB1 307 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 MOCS3O95396 460 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 PDGFRBP09619 1106 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 NPR3P17342 541 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 TKTP29401 623 aaKnown RBP12.4□□□□□ -0.42
PDPN-211ENST00000617617 CASQ1P31415 396 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 MAGEA11P43364 429 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 ALDH7A1P49419 539 aaKnown RBP12.4□□□□□ -0.42
PDPN-211ENST00000617617 TSPY1Q01534 308 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 ORC1Q13415 861 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 RAB41Q5JT25 222 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 VARS2Q5ST30 1063 aaKnown RBP12.4□□□□□ -0.42
PDPN-211ENST00000617617 MEI1Q5TIA1 1274 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 MMS22LQ6ZRQ5 1243 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 DDX53Q86TM3 631 aaKnown RBP12.4□□□□□ -0.42
PDPN-211ENST00000617617 XYLT1Q86Y38 959 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 DCP1BQ8IZD4 617 aaKnown RBP12.4□□□□□ -0.42
PDPN-211ENST00000617617 OR10T2Q8NGX3 314 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 C18orf8Q96DM3 657 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 SMARCD1Q96GM5 515 aa12.4□□□□□ -0.42
PDPN-211ENST00000617617 NAPGQ99747 312 aaPredicted RBP12.4□□□□□ -0.42
PDPN-211ENST00000617617 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDPN-211ENST00000617617 IRX2Q9BZI1 471 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms