RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 PHOX2BQ99453 314 aa20.53■□□□□ 0.88
CTSA-217ENST00000607482 KCTD10Q9H3F6 313 aa20.53■□□□□ 0.88
CTSA-217ENST00000607482 NDRG2Q9UN36 371 aaKnown RBP20.53■□□□□ 0.88
CTSA-217ENST00000607482 LRRIQ3A6PVS8 624 aaPredicted RBP20.52■□□□□ 0.88
CTSA-217ENST00000607482 SMC2O95347 1197 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 NR2F2P24468 414 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 DDX6P26196 483 aaKnown RBP eCLIP20.52■□□□□ 0.88
CTSA-217ENST00000607482 NLRP12P59046 1061 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 MDH1BQ5I0G3 518 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 MAB21L3Q8N8X9 362 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 PARD3BQ8TEW8 1205 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 KBTBD7Q8WVZ9 684 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 ZNF516Q92618 1163 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 MYLPFQ96A32 169 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 MRPL45Q9BRJ2 306 aaKnown RBP20.52■□□□□ 0.88
CTSA-217ENST00000607482 OSBPL6Q9BZF3 934 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 TRPC7Q9HCX4 862 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 LTB4R2Q9NPC1 389 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 EHD2Q9NZN4 543 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 PIAS3Q9Y6X2 628 aa20.52■□□□□ 0.88
CTSA-217ENST00000607482 SLC38A8A6NNN8 435 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 CHADO15335 359 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 TACC1O75410 805 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 FAM163BP0C2L3 166 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 BDNFP23560 247 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 KCNB1Q14721 858 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 ARHGAP29Q52LW3 1261 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 CC2D1AQ6P1N0 951 aaPredicted RBP20.51■□□□□ 0.87
CTSA-217ENST00000607482 FAM171BQ6P995 826 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 VSTM1Q6UX27 236 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 C1orf210Q8IVY1 113 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 CMTM8Q8IZV2 173 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 CELF5Q8N6W0 485 aaKnown RBP20.51■□□□□ 0.87
CTSA-217ENST00000607482 CCDC150Q8NCX0 1101 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 STKLD1Q8NE28 680 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 MYCBPAPQ8TBZ2 947 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 FAM3CQ92520 227 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 IMPG2Q9BZV3 1241 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 DMAC2Q9NW81 257 aa20.51■□□□□ 0.87
CTSA-217ENST00000607482 TRIM66O15016 1216 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 LAMTOR5O43504 91 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 LRRN2O75325 713 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 MAGEA9P43362 315 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 MAGEA11P43364 429 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 SGSM1Q2NKQ1 1148 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 TDRD10Q5VZ19 366 aaKnown RBP20.5■□□□□ 0.87
CTSA-217ENST00000607482 SCARA5Q6ZMJ2 495 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 GUF1Q8N442 669 aaKnown RBP20.5■□□□□ 0.87
CTSA-217ENST00000607482 TMC2Q8TDI7 906 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 BPIFB1Q8TDL5 484 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 MED10Q9BTT4 135 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 DDX23Q9BUQ8 820 aaKnown RBP20.5■□□□□ 0.87
CTSA-217ENST00000607482 SLC46A2Q9BY10 475 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 SMG9Q9H0W8 520 aaKnown RBP20.5■□□□□ 0.87
CTSA-217ENST00000607482 IL21Q9HBE4 155 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 TRPV5Q9NQA5 729 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 OBP2AQ9NY56 170 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 TRAF3IP3Q9Y228 551 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 MTF2Q9Y483 593 aaPredicted RBP20.5■□□□□ 0.87
CTSA-217ENST00000607482 ATP8B3O60423 1300 aa20.5■□□□□ 0.87
CTSA-217ENST00000607482 IKBKBO14920 756 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 GFRA3O60609 400 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 STAU1O95793 577 aaKnown RBP20.49■□□□□ 0.87
CTSA-217ENST00000607482 GLULP15104 373 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 HMGA1P17096 107 aaKnown RBP20.49■□□□□ 0.87
CTSA-217ENST00000607482 PTPN1P18031 435 aaKnown RBP20.49■□□□□ 0.87
CTSA-217ENST00000607482 PSMC2P35998 433 aaKnown RBP20.49■□□□□ 0.87
CTSA-217ENST00000607482 PIK3CAP42336 1068 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 VAMP7P51809 220 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 PLCB2Q00722 1185 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 ADAM9Q13443 819 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 PNOCQ13519 176 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 CCDC142Q17RM4 750 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 TXNDC8Q6A555 127 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 C1orf228Q6PIY5 440 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 INTS8Q75QN2 995 aaKnown RBP20.49■□□□□ 0.87
CTSA-217ENST00000607482 FRMD5Q7Z6J6 570 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 FAM186BQ8IYM0 893 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 TTC8Q8TAM2 541 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 NKD2Q969F2 451 aaPredicted RBP20.49■□□□□ 0.87
CTSA-217ENST00000607482 PCED1BQ96HM7 432 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 TNIP3Q96KP6 325 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 PKMYT1Q99640 499 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 TSG101Q99816 390 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 DNAI2Q9GZS0 605 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 MMRN2Q9H8L6 949 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 CRTAC1Q9NQ79 661 aa20.49■□□□□ 0.87
CTSA-217ENST00000607482 TRAV19A0A0A6YYK7 116 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 NOL4O94818 638 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 CKMP06732 381 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 DLG4P78352 724 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 FAM160A1Q05DH4 1040 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 FCHO2Q0JRZ9 810 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 ZC3H14Q6PJT7 736 aaKnown RBP20.48■□□□□ 0.87
CTSA-217ENST00000607482 LIMS2Q7Z4I7 341 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 MON1AQ86VX9 555 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 TMEM174Q8WUU8 243 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 SMARCE1Q969G3 411 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 RSPRY1Q96DX4 576 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 TRMT2BQ96GJ1 504 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms