RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 LMO3Q8TAP4 145 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 ELSPBP1Q96BH3 223 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 PCED1BQ96HM7 432 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 SPATA17Q96L03 361 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 LPIN3Q9BQK8 851 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 SYT15Q9BQS2 421 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 SMYD3Q9H7B4 428 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 TRPV5Q9NQA5 729 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 ASAH2Q9NR71 780 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 WNT16Q9UBV4 365 aa9.39□□□□□ -0.91
SSBP4-208ENST00000600628 MRPS23Q9Y3D9 190 aaKnown RBP9.39□□□□□ -0.91
SSBP4-208ENST00000600628 MYH10P35580 1976 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 FAM92AA1XBS5 289 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
SSBP4-208ENST00000600628 TNFRSF10BO14763 440 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 PSMA7O14818 248 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 NARSO43776 548 aaKnown RBP9.38□□□□□ -0.91
SSBP4-208ENST00000600628 FGF19O95750 216 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 PDGFBP01127 241 aaPredicted RBP9.38□□□□□ -0.91
SSBP4-208ENST00000600628 EPB41P11171 864 aaKnown RBP9.38□□□□□ -0.91
SSBP4-208ENST00000600628 ALDH1A3P47895 512 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 GCLMP48507 274 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 CACNA2D1P54289 1103 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 NOP14P78316 857 aaKnown RBP9.38□□□□□ -0.91
SSBP4-208ENST00000600628 TRPC3Q13507 836 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 CBWD6Q4V339 395 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 ZNF667Q5HYK9 610 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 CBWD3Q5JTY5 395 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 FAM78AQ5JUQ0 283 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 CBWD5Q5RIA9 395 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 CYP4A22Q5TCH4 519 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 TANGO2Q6ICL3 276 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 IQCEQ6IPM2 695 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 MTSS1LQ765P7 747 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 ITIH5Q86UX2 942 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 UNC93AQ86WB7 457 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 IRF2BP1Q8IU81 584 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 SUGP1Q8IWZ8 645 aaKnown RBP9.38□□□□□ -0.91
SSBP4-208ENST00000600628 FUKQ8N0W3 1084 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 ZNF687Q8N1G0 1237 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 ELMOD1Q8N336 334 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 FBXL13Q8NEE6 735 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 SMARCD2Q92925 531 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 MYLPFQ96A32 169 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 ELMO3Q96BJ8 720 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 RSPRY1Q96DX4 576 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 C8orf48Q96LL4 319 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 LRRC3BQ96PB8 259 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 DDX23Q9BUQ8 820 aaKnown RBP9.38□□□□□ -0.91
SSBP4-208ENST00000600628 PLA2G2FQ9BZM2 168 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 GPR88Q9GZN0 384 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 KCNH6Q9H252 994 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 DPEP3Q9H4B8 488 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 CYP3A43Q9HB55 503 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 CSNK1G1Q9HCP0 422 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 ABI2Q9NYB9 513 aaPredicted RBP9.38□□□□□ -0.91
SSBP4-208ENST00000600628 ZMYM5Q9UJ78 669 aa9.38□□□□□ -0.91
SSBP4-208ENST00000600628 CACNA1IQ9P0X4 2223 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 TICRRQ7Z2Z1 1910 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 COL4A3Q01955 1670 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 KRBA1A5PL33 1030 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 CILPO75339 1184 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 PDGFRBP09619 1106 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 CSH1P0DML2 217 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 CSH2P0DML3 217 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 KRT13P13646 458 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 AVPR2P30518 371 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 GPR15P49685 360 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 MXI1P50539 228 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 NLRP12P59046 1061 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 PSMC1P62191 440 aaKnown RBP9.37□□□□□ -0.91
SSBP4-208ENST00000600628 TNNC1P63316 161 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 FCHO2Q0JRZ9 810 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 BIRC3Q13489 604 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 STIM1Q13586 685 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 STXBP5Q5T5C0 1151 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 IER5LQ5T953 404 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 SPOPLQ6IQ16 392 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 C4orf50Q6ZRC1 276 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 PDZD4Q76G19 769 aaPredicted RBP9.37□□□□□ -0.91
SSBP4-208ENST00000600628 ST13P5Q8NFI4 369 aaPredicted RBP9.37□□□□□ -0.91
SSBP4-208ENST00000600628 GPT2Q8TD30 523 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 NELFBQ8WX92 580 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 ING5Q8WYH8 240 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 TWNKQ96RR1 684 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 MMS19Q96T76 1030 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 TSG101Q99816 390 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 PI4K2AQ9BTU6 479 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 B3GNT5Q9BYG0 378 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 NIF3L1Q9GZT8 377 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 METTL14Q9HCE5 456 aaKnown RBP9.37□□□□□ -0.91
SSBP4-208ENST00000600628 RAB20Q9NX57 234 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 OBP2AQ9NY56 170 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 NXF1Q9UBU9 619 aaKnown RBP9.37□□□□□ -0.91
SSBP4-208ENST00000600628 HMGXB4Q9UGU5 601 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 ARMCX3Q9UH62 379 aaPredicted RBP9.37□□□□□ -0.91
SSBP4-208ENST00000600628 RWDD2AQ9UIY3 292 aa9.37□□□□□ -0.91
SSBP4-208ENST00000600628 CFAP54Q96N23 3096 aa9.36□□□□□ -0.91
SSBP4-208ENST00000600628 A0A1W2PRU2 124 aa9.36□□□□□ -0.91
SSBP4-208ENST00000600628 BICDL2A1A5D9 508 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms