RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 METTL14Q9HCE5 456 aaKnown RBP17.29■□□□□ 0.36
LSM4-206ENST00000600289 ASAH2Q9NR71 780 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 GDE1Q9NZC3 331 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 LIMD1Q9UGP4 676 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 MRPS23Q9Y3D9 190 aaKnown RBP17.29■□□□□ 0.36
LSM4-206ENST00000600289 NME7Q9Y5B8 376 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 KIF26AQ9ULI4 1882 aaPredicted RBP17.29■□□□□ 0.36
LSM4-206ENST00000600289 ANAPC1Q9H1A4 1944 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 FGF19O95750 216 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 LMO2P25791 158 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 GNL1P36915 607 aaPredicted RBP17.28■□□□□ 0.36
LSM4-206ENST00000600289 PIK3CAP42336 1068 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 MAGEA11P43364 429 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 GCLMP48507 274 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 PAK1Q13153 545 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 HTR4Q13639 388 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 MGAT5BQ3V5L5 792 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 CYP4A22Q5TCH4 519 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 C4orf50Q6ZRC1 276 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 PDZD4Q76G19 769 aaPredicted RBP17.28■□□□□ 0.36
LSM4-206ENST00000600289 TAS1R2Q8TE23 839 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 CEP295NLQ96MC4 621 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 SEPT5Q99719 369 aaPredicted RBP17.28■□□□□ 0.36
LSM4-206ENST00000600289 SNX25Q9H3E2 840 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 KCNK12Q9HB15 430 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 CRTAC1Q9NQ79 661 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 ABI2Q9NYB9 513 aaPredicted RBP17.28■□□□□ 0.36
LSM4-206ENST00000600289 NXF1Q9UBU9 619 aaKnown RBP17.28■□□□□ 0.36
LSM4-206ENST00000600289 ARMCX3Q9UH62 379 aaPredicted RBP17.28■□□□□ 0.36
LSM4-206ENST00000600289 GTF3C4Q9UKN8 822 aa17.28■□□□□ 0.36
LSM4-206ENST00000600289 OTOGLQ3ZCN5 2332 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 MYBPHLA2RUH7 354 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 HCRTO43612 131 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 MOSPD3O75425 235 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 MXI1P50539 228 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 TDGQ13569 410 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 PUM1Q14671 1186 aaKnown RBP eCLIP17.27■□□□□ 0.368e-8■□□□□ 9.6
LSM4-206ENST00000600289 VEPH1Q14D04 833 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 MTSS1LQ765P7 747 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 MYCBPAPQ8TBZ2 947 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 SLC35C1Q96A29 364 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 EEF2KMTQ96G04 330 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 BCO2Q9BYV7 579 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 IMPG2Q9BZV3 1241 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 NUP62CLQ9H1M0 184 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 FAM124BQ9H5Z6 455 aaPredicted RBP17.27■□□□□ 0.36
LSM4-206ENST00000600289 SMYD3Q9H7B4 428 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 CTNND2Q9UQB3 1225 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 COQ4Q9Y3A0 265 aa17.27■□□□□ 0.36
LSM4-206ENST00000600289 HELZP42694 1942 aaKnown RBP17.27■□□□□ 0.35
LSM4-206ENST00000600289 COL4A2P08572 1712 aa17.27■□□□□ 0.35
LSM4-206ENST00000600289 GOLGA6L22H0YM25 854 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 PMM2O15305 246 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 GNA14O95837 355 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 ASGR2P07307 311 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 CEBPBP17676 345 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 CCR2P41597 374 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 ASPAP45381 313 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 MARSP56192 900 aaKnown RBP17.26■□□□□ 0.35
LSM4-206ENST00000600289 RPL10AP62906 217 aaKnown RBP17.26■□□□□ 0.35
LSM4-206ENST00000600289 NOP14P78316 857 aaKnown RBP17.26■□□□□ 0.35
LSM4-206ENST00000600289 ASTLQ6HA08 431 aaPredicted RBP17.26■□□□□ 0.35
LSM4-206ENST00000600289 KLHL10Q6JEL2 608 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 VSTM1Q6UX27 236 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 DNAJB7Q7Z6W7 309 aaPredicted RBP17.26■□□□□ 0.35
LSM4-206ENST00000600289 UNC93AQ86WB7 457 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 SPATA2LQ8IUW3 424 aaPredicted RBP17.26■□□□□ 0.35
LSM4-206ENST00000600289 HS6ST3Q8IZP7 471 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 MLKLQ8NB16 471 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 FBXL13Q8NEE6 735 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 OR6B3Q8NGW1 331 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 MYLPFQ96A32 169 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 GPR88Q9GZN0 384 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 SDCBP2Q9H190 292 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 SMOC2Q9H3U7 446 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 CYP3A43Q9HB55 503 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 DLL3Q9NYJ7 618 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 RWDD2AQ9UIY3 292 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 DUSP12Q9UNI6 340 aa17.26■□□□□ 0.35
LSM4-206ENST00000600289 SPTBN2O15020 2390 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 A8MXQ7 604 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 ATP2C2O75185 946 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 SOAT2O75908 522 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 PDGFRBP09619 1106 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 PSMC1P62191 440 aaKnown RBP17.25■□□□□ 0.35
LSM4-206ENST00000600289 INCA1Q0VD86 236 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 CCDC142Q17RM4 750 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 KIAA2013Q8IYS2 634 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 B3GALNT2Q8NCR0 500 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 CCDC150Q8NCX0 1101 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 TCEAL4Q96EI5 215 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 PCED1BQ96HM7 432 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 PI4K2AQ9BTU6 479 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 NIF3L1Q9GZT8 377 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 APOBEC3GQ9HC16 384 aaKnown RBP17.25■□□□□ 0.35
LSM4-206ENST00000600289 MAGEC2Q9UBF1 373 aaPredicted RBP17.25■□□□□ 0.35
LSM4-206ENST00000600289 MYH10P35580 1976 aa17.25■□□□□ 0.35
LSM4-206ENST00000600289 NOL4O94818 638 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 CSH1P0DML2 217 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 CSH2P0DML3 217 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms