RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 YAF2Q8IY57 180 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 CCDC105Q8IYK2 499 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 FAM186BQ8IYM0 893 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 OR6B3Q8NGW1 331 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 MYCBPAPQ8TBZ2 947 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 PLEKHO2Q8TD55 490 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 GIPC2Q8TF65 315 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 ZSWIM3Q96MP5 696 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 PHOX2BQ99453 314 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 DNAI2Q9GZS0 605 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 NXF1Q9UBU9 619 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 MAPK8IP1Q9UQF2 711 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 MRPS17Q9Y2R5 130 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 ATP8B3O60423 1300 aa18.95■□□□□ 0.62
SHKBP1-204ENST00000594862 MYBPHLA2RUH7 354 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 DPYSL4O14531 572 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 TRIM66O15016 1216 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 STX10O60499 249 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 NOL4O94818 638 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 CYP2F1P24903 491 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 ANXA13P27216 316 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 MAGEA9P43362 315 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 ADAM9Q13443 819 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 SLC44A4Q53GD3 710 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 C1orf228Q6PIY5 440 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 CCDC150Q8NCX0 1101 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 ST13P5Q8NFI4 369 aaPredicted RBP18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 SPATA20Q8TB22 786 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 MRPS31Q92665 395 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 MYLPFQ96A32 169 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 MSANTD3Q96H12 275 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 TNIP3Q96KP6 325 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 MYRFLQ96LU7 910 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 NELL2Q99435 816 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 MRPL45Q9BRJ2 306 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 DDX23Q9BUQ8 820 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 OSBPL6Q9BZF3 934 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 ELOVL4Q9GZR5 314 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 IL21Q9HBE4 155 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 SIT1Q9Y3P8 196 aa18.94■□□□□ 0.62
SHKBP1-204ENST00000594862 MYO15AQ9UKN7 3530 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 KANSL1LA0AUZ9 987 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 A8MXQ7 604 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 ZNF263O14978 683 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 CETN3O15182 167 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 AKAP3O75969 853 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 EPB41P11171 864 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 HMGA1P17096 107 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 LMO2P25791 158 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 GTF2H1P32780 548 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 PIK3CAP42336 1068 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 MLLT6P55198 1093 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 NLRP12P59046 1061 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 PSMC1P62191 440 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 CYP27A1Q02318 531 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 LRRC63Q05C16 580 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 VITQ6UXI7 678 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 SV2AQ7L0J3 742 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 SCN4BQ8IWT1 228 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 SPATA17Q96L03 361 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 PLA2G2FQ9BZM2 168 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 KIF9Q9HAQ2 790 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 CRTAC1Q9NQ79 661 aa18.93■□□□□ 0.62
SHKBP1-204ENST00000594862 SLC38A8A6NNN8 435 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 HEPACAM2A8MVW5 462 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 MAN2B1O00754 1011 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 PDGFRBP09619 1106 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 GLULP15104 373 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 GDI1P31150 447 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 ANP32AP39687 249 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 VIPR2P41587 438 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 PDE6CP51160 858 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 DLG4P78352 724 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 PLCB2Q00722 1185 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 FCHO2Q0JRZ9 810 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 GRM2Q14416 872 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 ARHGAP29Q52LW3 1261 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 POTEHQ6S545 545 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 ARID3BQ8IVW6 561 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 PJA1Q8NG27 643 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 PCED1BQ96HM7 432 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 CHMP5Q9NZZ3 219 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 MAGED2Q9UNF1 606 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 PCDHA5Q9Y5H7 936 aa18.92■□□□□ 0.62
SHKBP1-204ENST00000594862 NRG2O14511 850 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 PSMA7O14818 248 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 CHADO15335 359 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 NCAM2O15394 837 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 SLC16A3O15427 465 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 ATP2C2O75185 946 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 VNN1O95497 513 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 ASS1P00966 412 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 PTPN1P18031 435 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 AVPR1AP37288 418 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 GRIK1P39086 918 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 MCCD1P59942 119 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 CYP4F8P98187 520 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 FKBP3Q00688 224 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 TCF15Q12870 199 aa18.91■□□□□ 0.62
SHKBP1-204ENST00000594862 DDR2Q16832 855 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms