RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TTC4O95801 387 aa16.6■□□□□ 0.25
MBD1-227ENST00000592060 C1QTNF8P60827 252 aa16.6■□□□□ 0.25
MBD1-227ENST00000592060 IFI35P80217 286 aaPredicted RBP16.6■□□□□ 0.25
MBD1-227ENST00000592060 RELL1Q8IUW5 271 aa16.6■□□□□ 0.25
MBD1-227ENST00000592060 GLIS1Q8NBF1 620 aa16.6■□□□□ 0.25
MBD1-227ENST00000592060 NKD2Q969F2 451 aaPredicted RBP16.6■□□□□ 0.25
MBD1-227ENST00000592060 CCT8L2Q96SF2 557 aa16.6■□□□□ 0.25
MBD1-227ENST00000592060 SETD4Q9NVD3 440 aa16.6■□□□□ 0.25
MBD1-227ENST00000592060 NINJ2Q9NZG7 142 aa16.6■□□□□ 0.25
MBD1-227ENST00000592060 DRG1Q9Y295 367 aaKnown RBP16.6■□□□□ 0.25
MBD1-227ENST00000592060 RRN3P2A6NIE6 340 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 SLC15A5A6NIM6 579 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 ACSL3O95573 720 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 FAM107AO95990 144 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 NDST1P52848 882 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 VCPP55072 806 aaKnown RBP16.59■□□□□ 0.25
MBD1-227ENST00000592060 EMC1Q8N766 993 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 CCHCR1Q8TD31 782 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 CENPTQ96BT3 561 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 KIF12Q96FN5 646 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 PWWP2AQ96N64 755 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 CXCL16Q9H2A7 254 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 DNAJC17Q9NVM6 304 aaKnown RBP16.59■□□□□ 0.25
MBD1-227ENST00000592060 EFR3BQ9Y2G0 817 aa16.59■□□□□ 0.25
MBD1-227ENST00000592060 E7EVH7 732 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 MYO1CO00159 1063 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 DNALI1O14645 258 aaPredicted RBP16.58■□□□□ 0.25
MBD1-227ENST00000592060 GPR32O75388 356 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 NPTXRO95502 500 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 KRT7P08729 469 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 HOXA11P31270 313 aaPredicted RBP16.58■□□□□ 0.25
MBD1-227ENST00000592060 PPARDQ03181 441 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 KIZQ2M2Z5 673 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 GSTA5Q7RTV2 222 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 SLC35B2Q8TB61 432 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 SNX27Q96L92 541 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 HEXIM2Q96MH2 286 aaKnown RBP16.58■□□□□ 0.25
MBD1-227ENST00000592060 FOXP3Q9BZS1 431 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 PPANQ9NQ55 473 aaKnown RBP16.58■□□□□ 0.25
MBD1-227ENST00000592060 DERAQ9Y315 318 aa16.58■□□□□ 0.25
MBD1-227ENST00000592060 GMNCA6NCL1 334 aa16.58■□□□□ 0.24
MBD1-227ENST00000592060 SLCO1A2P46721 670 aa16.58■□□□□ 0.24
MBD1-227ENST00000592060 P3H1Q32P28 736 aa16.58■□□□□ 0.24
MBD1-227ENST00000592060 LCLAT1Q6UWP7 414 aa16.58■□□□□ 0.24
MBD1-227ENST00000592060 ZCCHC9Q8N567 271 aaKnown RBP16.58■□□□□ 0.24
MBD1-227ENST00000592060 TTC39CQ8N584 583 aa16.58■□□□□ 0.24
MBD1-227ENST00000592060 MDM1Q8TC05 714 aa16.58■□□□□ 0.24
MBD1-227ENST00000592060 STMN4Q9H169 189 aaPredicted RBP16.58■□□□□ 0.24
MBD1-227ENST00000592060 SYNCQ9H7C4 482 aa16.58■□□□□ 0.24
MBD1-227ENST00000592060 ZWILCHQ9H900 591 aa16.58■□□□□ 0.24
MBD1-227ENST00000592060 ATXN2Q99700 1313 aaKnown RBP16.57■□□□□ 0.24
MBD1-227ENST00000592060 A6NJR5 290 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 F2P00734 622 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 ITGAVP06756 1048 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 PFKMP08237 780 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 CORO7P57737 925 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 KYNUQ16719 465 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 HADHQ16836 314 aaKnown RBP16.57■□□□□ 0.24
MBD1-227ENST00000592060 SMTNL2Q2TAL5 461 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 UBA3Q8TBC4 463 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 KAT2BQ92831 832 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 HAUS1Q96CS2 278 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 ZMAT2Q96NC0 199 aaKnown RBP16.57■□□□□ 0.24
MBD1-227ENST00000592060 SERPINB12Q96P63 405 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 XPO6Q96QU8 1125 aaKnown RBP16.57■□□□□ 0.24
MBD1-227ENST00000592060 PLEKHA5Q9HAU0 1116 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 KIAA1257Q9ULG3 409 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 ZNF148Q9UQR1 794 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 GNEQ9Y223 722 aaKnown RBP16.57■□□□□ 0.24
MBD1-227ENST00000592060 MBLAC1A4D2B0 266 aaPredicted RBP16.57■□□□□ 0.24
MBD1-227ENST00000592060 TCEA3O75764 348 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 ZSCAN5DPP0CG00 497 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 SMIM10L2AP0DMW4 78 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 SMIM10L2BP0DMW5 78 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 CHN1P15882 459 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 KDELR1P24390 212 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 CDR1P51861 262 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 TMEM62Q0P6H9 643 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 ACAP1Q15027 740 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 LONRF1Q17RB8 773 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 MORN1Q5T089 497 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 ERMARDQ5T6L9 678 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 SLC27A1Q6PCB7 646 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 BBS12Q6ZW61 710 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 B4GALNT4Q76KP1 1039 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 ATXN2LQ8WWM7 1075 aaKnown RBP16.57■□□□□ 0.24
MBD1-227ENST00000592060 NT5C1AQ9BXI3 368 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 EIF2AQ9BY44 585 aaKnown RBP16.57■□□□□ 0.24
MBD1-227ENST00000592060 GCOM2Q9BZD3 368 aaPredicted RBP16.57■□□□□ 0.24
MBD1-227ENST00000592060 FAM49AQ9H0Q0 323 aaPredicted RBP16.57■□□□□ 0.24
MBD1-227ENST00000592060 CDHR5Q9HBB8 845 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 SNTG2Q9NY99 539 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 FAM169AQ9Y6X4 670 aa16.57■□□□□ 0.24
MBD1-227ENST00000592060 DOCK3Q8IZD9 2030 aa16.56■□□□□ 0.24
MBD1-227ENST00000592060 C5orf60A6NFR6 353 aa16.56■□□□□ 0.24
MBD1-227ENST00000592060 PPEF2O14830 753 aa16.56■□□□□ 0.24
MBD1-227ENST00000592060 ETS1P14921 441 aa16.56■□□□□ 0.24
MBD1-227ENST00000592060 ARSEP51690 589 aa16.56■□□□□ 0.24
MBD1-227ENST00000592060 IRF5Q13568 498 aa16.56■□□□□ 0.24
MBD1-227ENST00000592060 ZBTB6Q15916 424 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms